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NECEvent2014_5_1_scaffold_400_1

Organism: NECEvent2014_5_1_Staphylococcus_epidermidis_33_6

near complete RP 46 / 55 MC: 4 BSCG 45 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(1..2364)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor n=1 Tax=Staphylococcus epidermidis (strain ATCC 12228) RepID=MFD_STAES similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 788.0
  • Bit_score: 1559
  • Evalue 0.0
  • rbh
Transcription-repair-coupling factor {ECO:0000313|EMBL:ETJ21238.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 788.0
  • Bit_score: 1559
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 788.0
  • Bit_score: 1559
  • Evalue 0.0

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Taxonomy

human gut metagenome

Sequences

DNA sequence
Length: 2364
ATGATTGCAAATTACATTAGCGAAGATAATCGTTTTCAAGAATTAGATGAAGTCTTCGGCCAAGAGAATATTTTAGTTACGGGATTATCCCCGTCAGCGAAGGCAACAATTATTGCTGAAAAATATTTAAAAGATCATAAACAAATGCTACTCGTAACTAATAATTTATACCAAGCAGATAAAATCGAAACTGACATTTTACAATATGTAGATGACTCAGAAGTTTATAAATATCCTGTTCAAGATATAATGACTGAAGAGTTTTCTACTCAAAGTCCACAATTGATGAGTGAGCGTGTTAGAACGTTGACTGCGTTAGCCCAAGGCGAAAAAGGGTTATTTATTGTGCCTTTAAACGGCTTTAAAAAATGGCTAACACCGGTTGATTTATGGAAAGATCATCAAATGACGCTTAAAGTAGGTCAGGATATTGATGTTGATGCGTTCTTAAATAAATTAGTTAATATGGGTTATCGTCGAGAAAGTGTAGTGTCACATATTGGTGAGTTTTCATTGCGTGGTGGAATCATAGATATATATCCGTTGATAGGAACACCTGTGAGAATAGAGCTATTTGATACTGAAGTTGATTCCATCAGAGACTTTGATGTAGAAACACAACGTTCTAACGATAATATAAATCAAGTTGAAATCACAACAGCTAGTGACTACATTATTACTGATGAAGTGATACAACACTTACAAAATGAACTTAAAAAAGCATATGAATATACACGCCCTAAAATTGAAAAGTCCGTACGTAATGATTTAAAAGAGACATATGAAAGTTTTAAGTTGTTTGAATCTACCTTTTTCGATCATCAATTGTTACGACGTCTTGTTTCATTTATGTATGAAAAACCATCAACCCTTATTGACTATTTTCAAAAAAACGCGATTATTGTAGTTGATGAGTTTAATCGTATTAAGGAAACAGAAGAAACACTTACAACAGAAGTTGAAGATTTTATGAGTAACTTAATTGAGAGTGGAAATGGATTTATCGGACAAGGATTTATGAAGTATGAAAGTTTTGACGCATTATTAGAGCAACATGCCGTTGCATATTTCACATTATTTACATCTTCGATGCAAGTACCATTACAACATATTATTAAGTTCTCTTGTAAACCAGTTCAACAATTTTATGGTCAATATGACATTATGCGCTCGGAATTTCAAAGATACGTGCATCAAGATTACACTGTCGTAGTTCTTGTTGAAACTGAAACAAAAGTTGAACGTATTCAATCAATGCTTAATGAAATGCATATTCCAACAGTATCAAATATTCACGAAGATATTGATGGTGGTCAAGTTGTAGTGACGGAAGGTAGTCTTTCTGAAGGCTTTGAATTACCTTATATGCAGTTGGTAGTCATCACAGAAAGAGAATTATTTAAAACAAGACAAAAGAAACAACGTAAACGAACAAAAACGATTTCTAATGCTGAAAAAATAAAATCATATCAAGACCTAAATGTGGGCGATTATATAGTGCATGTGCATCATGGTGTCGGACGATACTTAGGTGTCGAAACACTAGAAGTTGGAGATACACATCGCGACTATATTAAATTGCAATATAAAGGAACTGATCAATTATTCGTTCCAGTTGATCAAATGGATCAAGTTCAAAAGTATGTGGCTTCTGAAGATAAGTCGCCTAGATTAAATAAATTAGGCGGGACAGAATGGAAAAAAACAAAGGCGAAAGTTCAACAAAGTGTTGAAGATATAGCTGATGAATTAATTGATTTGTATAAAGAACGTGAAATGTCTGTAGGTTATCAATACGGCCAAGATACTGCAGAGCAATCAGCATTTGAGCATGATTTTCCATATGAATTAACACCCGATCAAAGTAAGTCGATCGATGAAATTAAAGGTGACATGGAAAGAGCAAGACCTATGGACCGTCTTCTTTGTGGTGATGTGGGATATGGTAAAACTGAAGTGGCTGTCCGCGCAGCGTTTAAAGCTGTCATGGATGGTAAGCAAGTTGCGTTTTTAGTACCAACAACGATTCTTGCACAACAACACTACGAAACACTACTTGAACGTATGCAAGATTTTCCGGTCGAAATTCAATTGGTAAGTCGATTCCGCACAGCTAAAGAAATAAGGGAAACTAAAGAAGGGCTCAAATCAGGATATGTTGACATTGTCGTAGGTACACATAAATTATTAGGTAAAGATATTCAATATAAAGATTTGGGATTGCTTATTGTTGATGAAGAACAACGTTTTGGAGTGCGACATAAAGAACGCATTAAAACTTTGAAAAAAAACGTTGATGTACTGACGCTTACTGCAACACCAATACCAAGAACATTGCATATGAGTATGTTAGGTGTACGTGAC
PROTEIN sequence
Length: 788
MIANYISEDNRFQELDEVFGQENILVTGLSPSAKATIIAEKYLKDHKQMLLVTNNLYQADKIETDILQYVDDSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTALAQGEKGLFIVPLNGFKKWLTPVDLWKDHQMTLKVGQDIDVDAFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGTPVRIELFDTEVDSIRDFDVETQRSNDNINQVEITTASDYIITDEVIQHLQNELKKAYEYTRPKIEKSVRNDLKETYESFKLFESTFFDHQLLRRLVSFMYEKPSTLIDYFQKNAIIVVDEFNRIKETEETLTTEVEDFMSNLIESGNGFIGQGFMKYESFDALLEQHAVAYFTLFTSSMQVPLQHIIKFSCKPVQQFYGQYDIMRSEFQRYVHQDYTVVVLVETETKVERIQSMLNEMHIPTVSNIHEDIDGGQVVVTEGSLSEGFELPYMQLVVITERELFKTRQKKQRKRTKTISNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGDTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPRLNKLGGTEWKKTKAKVQQSVEDIADELIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMERARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVEIQLVSRFRTAKEIRETKEGLKSGYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKKNVDVLTLTATPIPRTLHMSMLGVRD