ggKbase home page

NECEvent2014_5_1_scaffold_650_2

Organism: NECEvent2014_5_1_Staphylococcus_epidermidis_33_6

near complete RP 46 / 55 MC: 4 BSCG 45 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 1340..2032

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 230.0
  • Bit_score: 462
  • Evalue 5.00e-127
Pseudouridine synthase n=7 Tax=Staphylococcus epidermidis RepID=Q5HNF7_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 230.0
  • Bit_score: 462
  • Evalue 3.60e-127
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 230.0
  • Bit_score: 462
  • Evalue 1.00e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 693
ATGAGATTAGATAAATTTCTAGCTAATATGGGTGTTGGAACGCGATCAGAAGTTAAACAGTTACTCAAAAAAGGATCTGTTAAAGTCAACCAAAATATAGTTAAGTTACCTAAACTTCATGTTAATCCTAATTCTGATGAGATAATGGTAAATGATGAAGTAGTTAGTTATATCGACAAAGTGTATATCATGTTAAACAAACCAAAAGGTTATATTTCAGCGACAGAGGATGAGGTGCATCCTACTATTATTGATTTGATACCTGAATATGCACATTTAAATATTTTTCCGGTCGGACGTTTGGACAAAGATACAGAAGGATTACTCCTTGTTACAAATGATGGACAGTTTAATCATGAAGTAATGAATCCCAATAAGCATGTTTCAAAGACTTATGAAGTCTATTCAAAACACCCAATAACTCAATTCGATATTGATAAATTTAAATCCGGAATAGAATTATCAGATGGAAAATTAAAGCCTGCAATTTTAAAGAAAGTTGATGATTATGTATCACATGTCACCATTTACGAAGGAAAATATCATCAAGTTAAAAGAATGTTTCATAGTATCGAAAATGAGGTATTAGAATTGAAACGCATAAAGATTGCTCAACTAGAACTAGATCATAATTTAGATTTGGGTAGTTACCGTTTGTTAACACAAATAGATTTTGATAATCTTAAGAACTAA
PROTEIN sequence
Length: 231
MRLDKFLANMGVGTRSEVKQLLKKGSVKVNQNIVKLPKLHVNPNSDEIMVNDEVVSYIDKVYIMLNKPKGYISATEDEVHPTIIDLIPEYAHLNIFPVGRLDKDTEGLLLVTNDGQFNHEVMNPNKHVSKTYEVYSKHPITQFDIDKFKSGIELSDGKLKPAILKKVDDYVSHVTIYEGKYHQVKRMFHSIENEVLELKRIKIAQLELDHNLDLGSYRLLTQIDFDNLKN*