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NECEvent2014_5_1_scaffold_2463_2

Organism: NECEvent2014_5_1_Staphylococcus_epidermidis_33_6

near complete RP 46 / 55 MC: 4 BSCG 45 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(1044..1865)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=46 Tax=Staphylococcus RepID=Q5HRT3_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 273.0
  • Bit_score: 539
  • Evalue 2.10e-150
  • rbh
LysR-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 273.0
  • Bit_score: 539
  • Evalue 5.90e-151
LysR substrate binding domain protein {ECO:0000313|EMBL:EFE58656.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(gre similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 273.0
  • Bit_score: 539
  • Evalue 2.90e-150

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 822
ATGGATCCGTATAAGGTATTAATTGAAGTAATGAAAACAGAAAGTTTTACTAGAGCAGCAGAAAATTTATATACTTCGCAGCCTTCTGTGAGTCGTGATATTAAACGTTTAGAATTAAAATATAATGTTAAAATATTTGAATTTAAATCTCCATATTTAAAACTAACTAGAGATGGCGAAAAGCTATTACAATACGCATTGCAACGGGAAAGTATTGAACAAGAATTATGGCAAAACTTAACATCGGAATCTGAAATCATCTCAGGCACCTTAACAATTGGAAGCAGTTATACATATGGTGAATATTTATTATCAGAACAGCTTACCAGTCTTATGCAACAATACCCTAAGTTACATATTCATTTACGTGTTAATAATTCAGATTCTGTTATAAATGATATTAAACACAACAGAGTAGATATAGGTATTGTAGAAAAGGAAATTCAAGACAATGCAATAAAATGTAAGGAAATAATGGAAGACGAAATGGTGTATATTTACAAAAAATCGATTCAACCTAGAATGGATATATGTTTCGTTAGAGAAAAAGGGTCTGGAACAAGGTTTTATCAGGAAGTAGGTCTTTCTGAGTTGAAATTAAATCCATATTTGATAGAAATTAACAATATTAAGATTATTAAACAAATGGTAGAGGCTGGAAATGGGTTTGCAATTATTTCAAAATCAGCACTTCATCCAGAAGATTATGAAAAATTAATGATAACAACTTTAAATGTGAAACGTCACTATTACCTTGCTCAACATGTTGATAAATATATAGGTGAAAATATTAGAGCTGTCATTGAAATGATTATGAAGTAG
PROTEIN sequence
Length: 274
MDPYKVLIEVMKTESFTRAAENLYTSQPSVSRDIKRLELKYNVKIFEFKSPYLKLTRDGEKLLQYALQRESIEQELWQNLTSESEIISGTLTIGSSYTYGEYLLSEQLTSLMQQYPKLHIHLRVNNSDSVINDIKHNRVDIGIVEKEIQDNAIKCKEIMEDEMVYIYKKSIQPRMDICFVREKGSGTRFYQEVGLSELKLNPYLIEINNIKIIKQMVEAGNGFAIISKSALHPEDYEKLMITTLNVKRHYYLAQHVDKYIGENIRAVIEMIMK*