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NECEvent2014_5_1_scaffold_1902_3

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 1693..1959

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 2.70e-41
DNA-directed RNA polymerase subunit omega n=133 Tax=Pseudomonas RepID=RPOZ_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 2.00e-41
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 5.50e-42

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCCCGCGTCACCGTTGAAGACTGCCTGGACAACGTCGATAACCGTTTCGAGCTGGTCATGCTCGCCACCAAGCGCGCCCGTCAGCTGGCTACCGGCGGCAAGGAGCCGAAAGTGGCCTGGGAAAACGACAAGCCGACCGTCGTCGCCCTGCGCGAGATCGCTTCCGGCCTGGTCGATGAGAACGTCGTCCAGCAGGAAGACATCGTCGAGGACGAACCGCTGTTCGCAGCGTTCGACGACGAGGCCAACACCGAGGCCCTGTAA
PROTEIN sequence
Length: 89
MARVTVEDCLDNVDNRFELVMLATKRARQLATGGKEPKVAWENDKPTVVALREIASGLVDENVVQQEDIVEDEPLFAAFDDEANTEAL*