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NECEvent2014_5_1_scaffold_4253_2

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 623..1156

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 361
  • Evalue 1.40e-97
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 361
  • Evalue 7.10e-97
Diaminopimelate epimerase n=62 Tax=Pseudomonas RepID=DAPF_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 361
  • Evalue 5.00e-97
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCTTTTGCGCTTCACCAAGATGCATGGCCTGGGCAACGACTTCATGGTCCTCGACCTGGTCAGCCAGCACGCCCATGTGCAGCCCAAGCACGTCAAGCTCTGGGGCGACCGCAACACCGGGGTCGGCTTCGACCAGTTGCTGATCGTCGAAGCCCCGAGCAGCCCCGACGTCGACTTCCGCTACCGGATCTTCAACGCCGACGGCTCCGAGGTCGAGCAGTGCGGCAACGGCGCACGCTGCTTCGCCCGCTTCGTTCAGGACAAGCGCCTGACGGTGAAGAAGAGCATCCGCGTAGAAACCAAGGGCGGCATCATCGAACTGAATATCCGCCCGGACGGCCAGGTCACGGTGGACATGGGTCCGCCGCGCCTGGCCCCGGCCGAGATACCGTTCCAGGCCGAGCGCGAAGCCTTGTCCTATGAGATAGAGGTGAATGGCCAGCGCGTCGAACTGGCCGCGGTATCCATGGGCAATCCCCATGGCGTGCTGCGCGTCGAGAACGTCGACAGCGCACCGGTACACAGCCTCGGT
PROTEIN sequence
Length: 178
MLLRFTKMHGLGNDFMVLDLVSQHAHVQPKHVKLWGDRNTGVGFDQLLIVEAPSSPDVDFRYRIFNADGSEVEQCGNGARCFARFVQDKRLTVKKSIRVETKGGIIELNIRPDGQVTVDMGPPRLAPAEIPFQAEREALSYEIEVNGQRVELAAVSMGNPHGVLRVENVDSAPVHSLG