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NECEvent2014_5_1_scaffold_2825_3

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 1151..1702

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 362
  • Evalue 8.60e-98
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1402581 species="Bacteria; Prot similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 362
  • Evalue 4.30e-97
Shikimate dehydrogenase n=19 Tax=Pseudomonas aeruginosa RepID=G2L270_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 362
  • Evalue 3.10e-97
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGCGCGCCGCGATCGGTTCTCGCCGGCCTGATCGGTGCCGGCATCCAGGCGTCGCGGACCCCTGCCCTGCACGAGCGCGAGGGCGACGCCCAAGGCATCCGCTATCTGTACCGGCTGATCGATCTCGACCCGCTGGGCAAGTCGGCGGACGACCTGGAGTTCCTGCTCGCCGCCGCCAGCGACCTCGGCTTCACCGGGCTGAACGTCACCTTCCCCTGCAAGCAGGCGATCATCCCCCTGCTCGACGACCTCTCCGCCGAGGCACGCGGCATCGGCGCGGTGAACACCGTGGTGCTGCGCGATGGCCGGCGCATCGGCCACAACACCGACTGCCTGGGCTTCGCCGAGGGCTTTCGGCGCGGCCTGGCCGACGCGCCGCGCCAGCGCGTGGTGCAGATGGGCGCGGGCGGCGCCGGCGCGGCAGTGGCCCATGCGCTGCTCGCCGAGGGCGTCGAGCGGCTGGTCCTGTTCGACGTCGACCCGGCGCGGGCCCAGGCCCTCGCGGACAACCTCAACCAGCACTTCGGCGCGCCACGAGCGCTCGCCGGC
PROTEIN sequence
Length: 184
MSAPRSVLAGLIGAGIQASRTPALHEREGDAQGIRYLYRLIDLDPLGKSADDLEFLLAAASDLGFTGLNVTFPCKQAIIPLLDDLSAEARGIGAVNTVVLRDGRRIGHNTDCLGFAEGFRRGLADAPRQRVVQMGAGGAGAAVAHALLAEGVERLVLFDVDPARAQALADNLNQHFGAPRALAG