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NECEvent2014_5_1_scaffold_2977_3

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(984..1298)

Top 3 Functional Annotations

Value Algorithm Source
Probable RNA-binding protein PA4753 n=134 Tax=Pseudomonas RepID=Y4753_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 203
  • Evalue 1.00e-49
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 203
  • Evalue 2.90e-50
RNA-binding protein {ECO:0000313|EMBL:ETD52036.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 203
  • Evalue 1.40e-49

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGGCGCTCACTCAAGAGCAGAAGAAACAGTTCAAATCTATCGGTCACCACCTGAAACCGGTATTGATCGTAGCCGAGAACGGCTTGACCGAAGGCGTTCTCGCCGAACTCGAGCGCGCACTCAACGATCACGAACTGATCAAGGTGAAACTGGCGCTGGCCGAGCGCGACGATCGCCGCGCCCTGCTCGACGAACTCTGCGCGCAGTCGCGCAGCGACCTGGTGCAAAGCATCGGCAAGATGGCGCTGGTCTATCGGAAGAACCCGAAGCCGAACAAGAATCTCTCGAACATCAGCCGTTTCGCCGGCATCTGA
PROTEIN sequence
Length: 105
MALTQEQKKQFKSIGHHLKPVLIVAENGLTEGVLAELERALNDHELIKVKLALAERDDRRALLDELCAQSRSDLVQSIGKMALVYRKNPKPNKNLSNISRFAGI*