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NECEvent2014_5_8_scaffold_433_30

Organism: NECEvent2014_5_8_Escherichia_coli_51_170_partial

partial RP 24 / 55 MC: 4 BSCG 23 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(26287..27225)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator lrhA n=481 Tax=Escherichia PF0_ECOLX">RepID=E2QPF0_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 611
  • Evalue 6.40e-172
  • rbh
lrhA; transcriptional regulator LrhA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 611
  • Evalue 1.80e-172
LysR substrate binding domain-containing protein {ECO:0000313|EMBL:EGB68200.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 611
  • Evalue 9.00e-172

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGATAAGTGCAAATCGTCCGATAATTAACCTCGACCTCGATCTGCTGAGAACATTTGTTGCTGTTGCCGATCTGAACACTTTTGCTGCCGCAGCTGCCGCTGTGTGTCGTACTCAGTCCGCCGTAAGTCAGCAAATGCAGCGTCTGGAACAACTTGTTGGGAAAGAACTGTTCGCTCGTCACGGTCGCAACAAACTGTTAACTGAACATGGCATTCAACTTCTTGGTTACGCCAGAAAAATTCTGCGTTTTAATGATGAGGCCTGCTCATCATTAATGTTCAGTAATCTTCAGGGCGTGTTAACTATCGGTGCTTCAGATGAATCTGCCGATACGATCTTACCTTTCCTGTTAAATCGCGTGAGTTCGGTTTATCCGAAACTAGCGCTGGATGTCCGCGTTAAACGTAATGCCTATATGGCAGAAATGCTGGAATCCCAGGAAGTGGATTTGATGGTAACCACCCATCGTCCTTCAACGTTTAAGGCATTGAACCTGCGTACCTCGCCAACACACTGGTACTGCGCAGCGGAATACGTATTGCAAAAAGGCGAGCCGATCCCTCTTGTATTGCTGGATGATCCTAGCCCGTTTCGCGATATGGTGCTGGCGACGCTTAATAAAGCAGATATTCCATGGCGACTGGCTTATGTCGCCTCGACGCTTCCGGCAGTTCGTGCGGCAGTAAAAGCCGGTCTTGGCGTGACGGCAAGGCCGGTCGAGATGATGAGTCCAGACCTGCGTGTGCTGAGTGGAGTAGATGGCTTACCGCCGCTACCCGATACCGAATATTTGCTGTGCTATGACCCGTCCAGTAATAATGAGCTGGCTCAGGTGATCTATCAGGCGATGGAGAGCTACCATAATCCGTGGCAATACAGCCCAATGTCTGCTCCGGAAGGCGATGACTCATTGTTGATTGAAAGGGATATCGAGTAA
PROTEIN sequence
Length: 313
MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSTFKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE*