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NECEvent2014_5_8_scaffold_570_28

Organism: NECEvent2014_5_8_Escherichia_coli_51_170_partial

partial RP 24 / 55 MC: 4 BSCG 23 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(29683..30384)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enteroba similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 467
  • Evalue 9.20e-129
Succinate dehydrogenase iron-sulfur subunit n=168 Tax=Escherichia RepID=DHSB_ECOLI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 467
  • Evalue 6.60e-129
sdhB; succinate dehydrogenase iron-sulfur subunit similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 467
  • Evalue 1.90e-129

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGAGACTCGAGTTTTCAATTTATCGCTATAACCCGGATGTTGATGATGCTCCGCGTATGCAGGATTACACCCTGGAAGCGGATGAAGGTCGCGACATGATGCTGCTGGATGCGCTTATCCAGCTGAAAGAGAAAGATCCCAGCCTGTCGTTCCGCCGCTCCTGCCGTGAAGGTGTGTGCGGTTCCGACGGTCTGAACATGAACGGCAAGAATGGTCTGGCCTGTATTACCCCGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATGGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGTTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCTGGTGGAATCCCGATAAGTTTATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATCGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGCGATGCATTCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGA
PROTEIN sequence
Length: 234
MRLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPKEMQEIFKNCP*