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NECEvent2014_5_8_scaffold_13_6

Organism: NECEvent2014_5_8_Veillonella_oral_taxon_158-rel_39_297

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4869..5519)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMZ0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 150.0
  • Bit_score: 85
  • Evalue 6.50e-14
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 150.0
  • Bit_score: 85
  • Evalue 1.80e-14
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDP23684.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 150.0
  • Bit_score: 85
  • Evalue 9.10e-14

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Taxonomy

Parvimonas micra → Parvimonas → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 651
ATGGCCAGACAAATAGGAGCACGTCTAAAAAAACTCAGAGAGGTATCTCGTCTCTCATTAGATTATGCCGCTAAATCTGTAGGTATTTCGAAACAGACTTTATTTAAATACGAAAATGATAAAATTACTAATATTCCATCAGATAAAATTAAGGATTTGGCTAGACTTTACCAAACTTCTCCGGCCTACATTATGGGATGGGAAGACGATCCATCTGTAAAAAAAGAAGTTGATGAAAATCACGCCCCTACAGTACCGTCTTTGCCTGAGCCTCCCCCAAATCCTTTGAACTTTAACACGGCTTTAGGAGCCAATGACGCTGCAAAGGCCCTTACTGTTGCAGACGAAGCTTTTTCGCCTCGAATAAGAAAAGGAGATACCGCTTTTGTTACAAGTTTATATAAGGATGAAAACTTAATTCCTAATAGAAGTATCTTGGCCATACAAGCAGTAGATCAAAATGGCGTTAAGACTCCCGACAATATAGTATTAAGATTCTTTTACTATACCCCCGACTTTAAAGGTATTATGATATATGCGCCGTCTTACGTACCGGAAGTATTCCCTCCGGTCTTCTATCCTTTCGAATATTTGAATAGTGAAACGCCTGTTATAGGAATAGTACGATCTGTGTCATTTAATGTGTTTTGA
PROTEIN sequence
Length: 217
MARQIGARLKKLREVSRLSLDYAAKSVGISKQTLFKYENDKITNIPSDKIKDLARLYQTSPAYIMGWEDDPSVKKEVDENHAPTVPSLPEPPPNPLNFNTALGANDAAKALTVADEAFSPRIRKGDTAFVTSLYKDENLIPNRSILAIQAVDQNGVKTPDNIVLRFFYYTPDFKGIMIYAPSYVPEVFPPVFYPFEYLNSETPVIGIVRSVSFNVF*