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NECEvent2014_5_8_scaffold_864_7

Organism: NECEvent2014_5_8_Escherichia_coli_49_16_v_partial

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: comp(6426..7457)

Top 3 Functional Annotations

Value Algorithm Source
Ribitol operon repressor protein n=23 Tax=Escherichia coli RepID=F4M1W5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 343.0
  • Bit_score: 674
  • Evalue 5.20e-191
  • rbh
ribitol operon repressor protein similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 343.0
  • Bit_score: 673
  • Evalue 4.30e-191
  • rbh
HTH-type transcriptional repressor {ECO:0000313|EMBL:KGM83494.1}; LacI family transcriptional regulator {ECO:0000313|EMBL:AKF21180.1}; Putative DNA-binding transcriptional repressor {ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 343.0
  • Bit_score: 673
  • Evalue 2.10e-190

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
GTGACACGCGTTGAGAAAACGAAGAAAACGACCATTTACGACCTGGCAGAATTAACCGGCGTTTCTGCCAGTGCGGTAAGCGCTATTTTGAATGGCAACTGGAAAAAGCGACGCATCAGCGCAAAGCTGGCTGAGAAGGTCACCCGTATTGCGGAAGAGCAGGGATATGCCATTAATCGGCAGGCAAGTTTACTGCGCAGTAAAAAATCCAACGTTATTGGCATGATTGTGCCGAAATATGACAACCGATACTTTGGATCGATTGCCGAAAAATTTGAAGAGATGGCGCGTGCCAGAGGATTACTGCCAATCATCACCTGTACGCGGCGACAGCCAGAACTGGAAATTGAGGCTGCTCGCGCCATGCTCTCCTGGCAGGTGGATTGGGTCATTGCTACCGGAGCGACTCAACCGGATAAAATAGCCCAAATGTGCCAGCAAGCGGGCGTACCGACACTGAATCTGGATCTGCCGGGAACACTGGCGCCGTCGATCATTTCTGATAACTATATGGGGGCGAAATTATTGACGGAAAGAATTTTAGCCAACAGCCAGAAACGCTATGGCAAGCTGGCACCTTTGACTTTTGTCGGTGGACGTATAAGCGATAACAATACTGCTGAACGTTTACGTGGTTTTGTCGATGCCCATCAGGCTTTGGGGATAACCGTACCGGATGAACATAAACTGGTTACCGGCTACTCTTCTGCTCGCGTAGAGGGATTACTGAAAGAGGTCTTCCAAAGCTCTGCAGTATCGCTTCACGGGTTATTCGTCAACTCGACAATCTCTCTTGAAGGGGTGGTTCGCTGGCTGGCGCAAACCGGGCAGACGGGAGCCAATCAACCGCCAATGGGGTGTTTTGACTGGGATCCTTTTGTTTCTCTGCTCGGGCACGATATCGATATGGTTCGTCAGGATGTACCCGCCATGCTCGAAAAAGTGTTTGAAATTGTGGATTCTGGCGATACCACCCTGCGTCGCATTGAGATACCGCCACAACTCATTCCGAGCCTGAATGTTGTCAGCTGA
PROTEIN sequence
Length: 344
VTRVEKTKKTTIYDLAELTGVSASAVSAILNGNWKKRRISAKLAEKVTRIAEEQGYAINRQASLLRSKKSNVIGMIVPKYDNRYFGSIAEKFEEMARARGLLPIITCTRRQPELEIEAARAMLSWQVDWVIATGATQPDKIAQMCQQAGVPTLNLDLPGTLAPSIISDNYMGAKLLTERILANSQKRYGKLAPLTFVGGRISDNNTAERLRGFVDAHQALGITVPDEHKLVTGYSSARVEGLLKEVFQSSAVSLHGLFVNSTISLEGVVRWLAQTGQTGANQPPMGCFDWDPFVSLLGHDIDMVRQDVPAMLEKVFEIVDSGDTTLRRIEIPPQLIPSLNVVS*