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NECEvent2014_6_3_scaffold_1288_3

Organism: NECEvent2014_6_3_Clostridium_paraputrificum_29_53

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 1
Location: 815..1465

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:EDO57606.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2- similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 217.0
  • Bit_score: 376
  • Evalue 3.40e-101
Site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 193.0
  • Bit_score: 315
  • Evalue 1.10e-83

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Taxonomy

Clostridium sp. L2-50 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 651
GTGGCAGAAGTTAATATCGGGGGACTTCCGCCCCATAGTCGTTCTCTAAGAATAAATAAAGGAGGATTGACTGTGAAACAAGATTTAATCAAAGATGTTGTTCAAGGAATGTTACCGTACTTGAACAATGCACAAAGCGAAAGGTTGCAAGAGGTGTTACAATACACCCTCGTAAGGTACGAGATAACAGAAAATAAGCAACAAGAAAAAATTTCGGAGCAGAATTTTGTAGAACTGTTCTTATCGGCAAAGCGAATAGAGGGCTCTTCTGAAAAATCTCTTAAGTACTACAAAGCTACTATTGAAGCTATGCTTAATGAACTCCAAAAAGATGTCAGACATATAGTTACAGATGATATAAGAGGATACCTGACAGAGAATCAGGAAAAGAAAAAGTCAAGTAAAGTTACAATAGACAATATACGCCGTATTCTTTCAAGTTTCTTCTCGTGGTTGGAAGATGAGGACTATATATTGAAAAGTCCTGTCAGGCGAATACATAAGGTCAAAACAGGCACGAACATTAAAGAAACATACTCTGACGAAGCATTGGAACTTATGAGAGATAACTGTACCGAGCCGAGGGACTTGGCAATGATAGATATGCTTGCTTCTACTGGTATGCGTGTAGGAGAAATGGTGCTACTTAAC
PROTEIN sequence
Length: 217
VAEVNIGGLPPHSRSLRINKGGLTVKQDLIKDVVQGMLPYLNNAQSERLQEVLQYTLVRYEITENKQQEKISEQNFVELFLSAKRIEGSSEKSLKYYKATIEAMLNELQKDVRHIVTDDIRGYLTENQEKKKSSKVTIDNIRRILSSFFSWLEDEDYILKSPVRRIHKVKTGTNIKETYSDEALELMRDNCTEPRDLAMIDMLASTGMRVGEMVLLN