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NECEvent2014_6_3_scaffold_856_2

Organism: NECEvent2014_6_3_Staphylococcus_epidermidis_32_7

near complete RP 44 / 55 MC: 2 BSCG 43 / 51 ASCG 11 / 38 MC: 2
Location: 1218..2324

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 368.0
  • Bit_score: 721
  • Evalue 1.10e-205
RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 368.0
  • Bit_score: 721
  • Evalue 5.60e-205

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1107
ATGTCTGACAACCAAGTTAAAATTAAAAAGCAAACAATTGATCCGACTTTAACACTAGAAGATGTTAAAAAACAATTAATTGATAAAGGAAAAAAAGAAGGTCATTTAAGTCACGAAGAAATCGCTGAAAAACTGCAAAATTTTGAAATGGACTCAGATCAAATGGATGATTTCTTCGACCAATTGAATGACAATGACATTACACTTGTTAATGAAAAAGATAGTTCTGACACGGATGATAAAATCAATCCTAATGATTTGAGTGCCCCTCCTGGTGTCAAAATCAATGACCCAGTGCGTATGTATTTAAAGGAAATTGGTAGAGTTAATCTTTTAAGTGCTCAAGAAGAAATTGAGCTTGCAAAAAGAATTGAACAAGGTGATGAAATTGCTAAATCACGATTAGCTGAAGCAAACTTGCGTTTAGTTGTTAGTATTGCTAAACGATATGTTGGTCGTGGAATGTTATTCTTAGATTTGATTCAAGAAGGTAATATGGGCTTAATTAAAGCTGTGGAAAAGTTTGATTTTAGCAAAGGATTTAAATTTTCAACATATGCCACTTGGTGGATTAGACAAGCTATTACACGAGCAATTGCTGACCAAGCACGTACAATTCGAATACCAGTACACATGGTAGAAACGATTAATAAATTGATTCGTGTTCAACGTCAATTATTGCAAGATTTAGGAAGAGATCCAGCTCCTGAAGAAATTGGAGAAGAAATGGATTTACCACCAGAAAAAGTCAGAGAGATTTTAAAAATTGCACAAGAACCCGTTTCATTAGAGACGCCAATTGGTGAAGAAGATGATAGTCATTTAGGAGATTTCATTGAGGACCAAGAAGCTCAAAGTCCATCTGACCATGCAGCATACGAATTGTTAAAAGAACAATTAGAAGATGTTTTAGATACACTTACTGACAGAGAAGAAAATGTTTTACGTTTACGTTTTGGTTTAGATGATGGACGAACAAGAACACTAGAAGAAGTTGGAAAAGTATTCGGTGTAACACGTGAAAGAATTCGTCAGATTGAAGCAAAAGCTTTAAGAAAACTAAGACATCCTAGTCGAAGTAAACGTCTTAAAGATTTCATGGATTAA
PROTEIN sequence
Length: 369
MSDNQVKIKKQTIDPTLTLEDVKKQLIDKGKKEGHLSHEEIAEKLQNFEMDSDQMDDFFDQLNDNDITLVNEKDSSDTDDKINPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIELAKRIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIGEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD*