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NECEvent2014_6_5_scaffold_636_8

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(5837..6352)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 171.0
  • Bit_score: 226
  • Evalue 3.40e-56
shikimate kinase family protein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 167.0
  • Bit_score: 217
  • Evalue 2.40e-54

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Taxonomy

Clostridium colicanis → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 516
ATGAGTATGTTAAAGGATAGGGTATTTTTAATAGGAATGCCTGGGTGTGGAAAAACTACAATAGGTAAAGTACTTGCTAAAGAGCTAAATTATACATTTTATGATATGGATAAATATATAGTAGATATATCAGGAAAAGAAGTCCATGAATTGTTTAATGAAGGTGAAGAGGTATTTAGAAAGTGGGAGACAGAAGCTTGTAAAGAGCTTTCTAAAAAGAGAAATAGCATTATTTCTACTGGGGGTGGAGTTATAAAAACTTCCATAAATAGAGAAATACTAAGAAGTAATAGTTTAGTAGTGTTTATAGATAGACCTGTTGAAAATATTATTGGAGATGTGGACATAAATACAAGACCTTTATTAAAAAATGGAGCTAGTGAAGTTTATAAGCTATATGAAGAAAGATATGAATTATATAAAGAAACTTCACATATAAAAGTTTTAAATGATGGATTTATAAGAGATACCATTGATAATATTAAGAAAAGCCTTAATGGCAGAATCAAGGAGTAA
PROTEIN sequence
Length: 172
MSMLKDRVFLIGMPGCGKTTIGKVLAKELNYTFYDMDKYIVDISGKEVHELFNEGEEVFRKWETEACKELSKKRNSIISTGGGVIKTSINREILRSNSLVVFIDRPVENIIGDVDINTRPLLKNGASEVYKLYEERYELYKETSHIKVLNDGFIRDTIDNIKKSLNGRIKE*