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NECEvent2014_6_5_scaffold_809_4

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(2917..3606)

Top 3 Functional Annotations

Value Algorithm Source
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 230.0
  • Bit_score: 191
  • Evalue 9.60e-46
celB; cellobiose-specific PTS, IIC component similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 233.0
  • Bit_score: 169
  • Evalue 1.30e-39

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Taxonomy

Coprobacillus sp. 29_1 → Coprobacillus → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
ATGACTTCATTTGGTACATTACAAAACTGTGTTGATACAATTATTACAAAACCATTCTTAAGTTTTGGTAATAACATATGGGTATTCTTATTTATACTTATCGTAGCTCAAGTACTTTGGTTCTTTGGAATTCATGGAACAAACTTAGTTTTAAATACTGTATGGCAACCAATTGCAATGGTAGCAATGGCAGCAAATTTAGAAGCATTTAATGCAGGAGAACCATTACCATATGTTTTAACAGCAGCATTTACTTGTTTTACAGGACAAGCTAAATTATCAGAAATAGTTGCTTTATGTGTTGTAGGTAAGTCAAAACAATCAAAGGCTATAGGTAAATTATCATTAGTACCAGCACTATTCAATATACACGAGCCATTTGTATTTGGTTTACCAGTAATCATGAACACTACATTAATGCTTCCATGGATATTTGTTGAAGCACTACAAGCGGGATTAGCATATTTATTAGTAATTTTAACAGGAGCAATTCCAATATTCCAAGCACCATGGACTTGTCCTCCAATTATACAACAATTAATTGCAACTAACTTTAATCCTTGGTCTGTAGTTATAACAATAGCAACTTTTGCATTAGGATTTGTTATATGGATACCATTCATGAAATTATTAGATAAGCAATACTTAGCAGCTGAAAAAGAACAAGAAACTTCAGGAGACTCTGTATAA
PROTEIN sequence
Length: 230
MTSFGTLQNCVDTIITKPFLSFGNNIWVFLFILIVAQVLWFFGIHGTNLVLNTVWQPIAMVAMAANLEAFNAGEPLPYVLTAAFTCFTGQAKLSEIVALCVVGKSKQSKAIGKLSLVPALFNIHEPFVFGLPVIMNTTLMLPWIFVEALQAGLAYLLVILTGAIPIFQAPWTCPPIIQQLIATNFNPWSVVITIATFALGFVIWIPFMKLLDKQYLAAEKEQETSGDSV*