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NECEvent2014_6_5_scaffold_1015_4

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(1954..3057)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD {ECO:0000313|EMBL:EOR24459.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 367.0
  • Bit_score: 687
  • Evalue 8.90e-195
DNA integration/recombination/invertion protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 384.0
  • Bit_score: 477
  • Evalue 2.80e-132

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1104
ATGGCAAGCTATAATCGATTATCTAAATCTAATTGGCAGGTAGTCATCTCATTAGGTTATGATGAAGCCGGAAAACGTACAAGACTAAAAAAGCAAGGTTTCAAAACAAAGAAAGAAGCAGAAATTTTTGTTACAGAAACATTGAATAAAAAAAACAAGGGTTATATAACACCAACTACAAATAGTATTTTGTTAAAAGATTTTATTTTAGAATGGTTTAATAACTATAAATCTAATACTCTAGGAATTAATACTAAGAATAATTATCTTAGTAGAATAAACTACCATATTATTCCCAAACTAGGTAATTTAAAGTTAACTGATATAACAAACATTACAATACAAAACTTTTATAATAGCTTAATTAATGAAAATAAACTTGCTCCTGCAAGTGCTAAAAAGATAATTGAAATATTAAATAACTGCTTTAAATATGCTAAGAAAAATAAACTTATTTATAATATTCCAACTGATATAGAAAAAATCAAGCTAGAAAAACCTAAAATAGATTATTGGGATAAAAATAATGTTGATTTTTTCTTAAACGAAATTCAAGATACTTATTTATATACTCCTGTATTTATTTCCTTACTTACAGGGTTAAGAGTAGGTGAACTTTGTGGACTTAGATGGTCTGATATAGATTTTGATAATGCCTTTATTACTGTTAATAATCAAGTAATCCAAGATAAGATTAATAAACAATTGCTTTTATCCGACGTTTTAAAGACTTCTACAAGCCACAGGAATGTTTCTATACCTAATGTGTTAATAGATCATCTAAAAGAGCTTAGAGAAGTTGATAGTGACCCTATGAATGGATTTATAATAAAAGATAGAAATAATTGTATGGCTAATCCTAGAAATGTTTCAATAGAGTTTACTAAAAAAGTATCTAAATATAAAAACCTTAAACAAATATCCTTCCATTCATTAAGGCATACCCATGCTACATTACTAATTTTTCATGGAGAGAATATAAAAGTAGTAAGTGATAGATTGGGACATAAAGATATTTCAGTAACTTTGAATACATATACTCACGTCATGGAAGATATGCAAAAGAATACAGCTAAACTTTTAGATTCCTTATTTAAACTCTAA
PROTEIN sequence
Length: 368
MASYNRLSKSNWQVVISLGYDEAGKRTRLKKQGFKTKKEAEIFVTETLNKKNKGYITPTTNSILLKDFILEWFNNYKSNTLGINTKNNYLSRINYHIIPKLGNLKLTDITNITIQNFYNSLINENKLAPASAKKIIEILNNCFKYAKKNKLIYNIPTDIEKIKLEKPKIDYWDKNNVDFFLNEIQDTYLYTPVFISLLTGLRVGELCGLRWSDIDFDNAFITVNNQVIQDKINKQLLLSDVLKTSTSHRNVSIPNVLIDHLKELREVDSDPMNGFIIKDRNNCMANPRNVSIEFTKKVSKYKNLKQISFHSLRHTHATLLIFHGENIKVVSDRLGHKDISVTLNTYTHVMEDMQKNTAKLLDSLFKL*