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NECEvent2014_6_5_scaffold_2113_4

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 2789..3481

Top 3 Functional Annotations

Value Algorithm Source
SIS domain-containing protein,MurPQ operon repressor,DNA-binding transcriptional repressor RpiR,Predicted phosphosugar isomerases,6-phospho 3-hexuloisomerase,Helix-turn-helix domain, rpiR family {ECO: similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 237.0
  • Bit_score: 220
  • Evalue 1.90e-54
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 230.0
  • Bit_score: 153
  • Evalue 1.00e-34

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 693
ATGAATATTGAACTTTTATCTCATAAACACAACTTAGATACATTAGAAAGAAAATTACTTCAGTATCTTTATGATAATATTGATGAAATAAAATCTATAGGTATAAGAAAACTTGCATCAGATAACTATACCTCAACATCTATGGTATATAAATTAGTTAAAAAACTAGGTTTTGAAGGTTATTCTGATATGATTCATTACATATCCTACACTTATAATAAAAGTGAAAATAATAATGAAAATGCATATTCAAAGCTTTATGATACTGTAAAACCTTATAAGAAAGATTTTAATTCAATTCTTTCTGAATATAAGAATAAACAAATTGTTATAACTGGCATGGGTTTCTCAGATATAATATCCAATTTTATTAGTGAAGCTTTATTTCTAAAAGGATATAGCTGTGCACATACACTACATCTTCAACTACTTTCGCCAGAAAATAAGGATAATCTATTAATAATAGCTATATCACGTTCTGGAAAAACCTCTAGACTAGTAGAACTAGTTGAAGAAGCTAATACTCATGGATTTAAAATTATTTCCTTTACAGCTAATAAAAATTCTAAATTAGCTAAAGCCTCTACCTTATCTGTTCCAATTGGAAGTTATGATAGCTTTAAAAGTATTTCAGAAGAATTCAACACATTTTTCGGTGAATTACTTCTTATCTTCGAATATCTTACGAATTAG
PROTEIN sequence
Length: 231
MNIELLSHKHNLDTLERKLLQYLYDNIDEIKSIGIRKLASDNYTSTSMVYKLVKKLGFEGYSDMIHYISYTYNKSENNNENAYSKLYDTVKPYKKDFNSILSEYKNKQIVITGMGFSDIISNFISEALFLKGYSCAHTLHLQLLSPENKDNLLIIAISRSGKTSRLVELVEEANTHGFKIISFTANKNSKLAKASTLSVPIGSYDSFKSISEEFNTFFGELLLIFEYLTN*