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NECEvent2014_6_5_scaffold_606_15

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 16045..16620

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 372
  • Evalue 6.60e-101
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 372
  • Evalue 3.30e-100

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGCGAGCAGTTAACGGACCAGGTCCTGGTAGAACGGGTCCAGAAGGGAGATCAGAAAGCCTTTAACCTACTGGTAGTACGCTATCAGCATAAGGTGGCGAGTCTGGTTTCTCGCTATGTACCGTCGGGTGATGTACCCGATGTAGTACAAGAAGCATTTATCAAAGCCTATCGTGCGCTGGACTCGTTCCGGGGGGATAGTGCTTTTTATACCTGGCTGTATCGTATTGCGGTCAATACAGCGAAGAATTACCTGGTCGCTCAGGGGCGTCGTCCACCTTCCAGTGATATAGATGCGATTGAAGCAGAAAATTACGAAAGTGGCGGTGCGCTGAAAGAAATTTCGAACCCTGAGAACTTAATGTTGTCAGAAGAACTGAGACAGATAGTTTTCCGAACTATTGAGTCCCTCCCGGAAGATTTACGCATGGCAATAACCTTGCGGGAGCTGGATGGCCTGAGCTATGAAGAGATAGCCGCTATCATGGATTGTCCGGTGGGTACGGTGCGTTCACGTATCTTCCGAGCGAGGGAAGCTATTGATAATAAAGTTCAACCGCTTATCAGGCGTTGA
PROTEIN sequence
Length: 192
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDIDAIEAENYESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR*