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NECEvent2014_6_5_scaffold_650_12

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(10385..11791)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane porin, OprD family protein {ECO:0000313|EMBL:KEL77560.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 468.0
  • Bit_score: 981
  • Evalue 5.00e-283
chiP; chitoporin similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 468.0
  • Bit_score: 978
  • Evalue 8.50e-283

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTATCACAGCAATGTCGGGTTTTGTTGTCGCTCCGCAGGTACACGCCGAAGGATTTATTGATGACTCAACCTTAACCGGCGGCATCTATTACTGGCAGCGTGAGCGTGACCGTAAAGATGTGACCGATCATGACAAATACAAAACCAACCTTTCTCACTCCACCTGGAACGCTAACCTCGACTTCCAGTCCGGTTATGCGGCCGATATGTTTGGTATTGATATCGCAGCATTTACCGCTATTGAAATGAACGAAAGTAGCGAAAGCGGCCATCCAAACGAAATCGCATTCTCTTCCAAAAATAAAGGCTATGACGAGGATTACTCCGGCGATAAGAGCGGGATTAGCCTTTATAAAGCAGCAGCTAAATTTAAATACGGCCCAACCTGGGCGCGTGCCGGTTACATTCAACCAACCGGGCAGACTCTGCTGGCACCGCACTGGAGCTTTATGCCAGGTACCTATCAGGGGGCTGAAGCCGGTGCCAACTTCGACTATGGTGATGCTGGCGCACTAAGCTTCTCCTATATGTGGGCTAACGAATATAAAGCACCGTGGCACATCGAAGTCGATAAATTCTATCAGGCTGATAAAAAGACCAGCGTTGATTACCTGCATTCAATCGGCGCGAAATATGACTTCAAAAATAACCTGTTGCTGGAAGCGGCATTTGGTCAGTCTGAAGGCTACGTCGATCAGTACTTCGCCAAAGCCAGCTACAAATTCGATTTAGGCGGTAACCCGTTTACTACCAGCTATCAATTCTACGGCGCACGTGACAAAGTTGACGATCGCACCGTGAACGATATTTATGACGGCACGGCCTGGCTGCAGGCGCTGACCTTCGGTTATAAAGTAGCGGAAGTGGTTGACCTGCGTCTGGAAGGCACATGGGTTAAAGCAGATGGGCAGCAAGGCTACTTCCTGCAGCGTATGACCCCGACCTACGCCTCATCAAACGGTCGCCTGGACGTGTGGTGGGATAACCGTTCTGACTTCAACGCCAACGGCGAAAAGGCAGTCTTCTTCGGCGCAATGTATGACCTGAAGAACTGGAACCTGCCGGGCTGGGCAGTGGGCGCGTCCTACGTTTACGCATGGGATGCCAAACCCGCTACCTGGCAGCTCAACCCGGATGCGTACTACGACAAAAACCGCACTATCGAAGAATCTTCTTACAGCCTGGATGCGGTTTACACCCTGCAGGATGGTCGTGCGAAGGGCACTATGTTTAAACTGCACTTCACCCAGTACGACAACCATTCAGATATTCCGAGCTGGGGTGGTGGTTACGGCAACATCTTCCAGGATGAGCGCGACGTGAAATTCATCGTTATTGCTCCGTTCACTATCTTCTAA
PROTEIN sequence
Length: 469
MRTFSGKRSTLALAIAGITAMSGFVVAPQVHAEGFIDDSTLTGGIYYWQRERDRKDVTDHDKYKTNLSHSTWNANLDFQSGYAADMFGIDIAAFTAIEMNESSESGHPNEIAFSSKNKGYDEDYSGDKSGISLYKAAAKFKYGPTWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWANEYKAPWHIEVDKFYQADKKTSVDYLHSIGAKYDFKNNLLLEAAFGQSEGYVDQYFAKASYKFDLGGNPFTTSYQFYGARDKVDDRTVNDIYDGTAWLQALTFGYKVAEVVDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDVWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGWAVGASYVYAWDAKPATWQLNPDAYYDKNRTIEESSYSLDAVYTLQDGRAKGTMFKLHFTQYDNHSDIPSWGGGYGNIFQDERDVKFIVIAPFTIF*