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NECEvent2014_6_5_scaffold_1513_6

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(4522..4659)

Top 3 Functional Annotations

Value Algorithm Source
ion channel protein Tsx similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 45.0
  • Bit_score: 106
  • Evalue 1.60e-21
Nucleoside-specific channel-forming protein tsx {ECO:0000313|EMBL:EIQ77336.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 45.0
  • Bit_score: 106
  • Evalue 8.00e-21

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 138
CACTACTCTGTCGTAGCGCGTTACTTCCATAACGGCGGTCAGTGGAAAGGTGGGGATACTCTGAACTGGGGCGAAGGCGACTTCAGCGCGAAATCTACCGGTTGGGGTGGTTACCTGGTCGTAGGTTACAACTTCTAA
PROTEIN sequence
Length: 46
HYSVVARYFHNGGQWKGGDTLNWGEGDFSAKSTGWGGYLVVGYNF*