ggKbase home page

NECEvent2014_6_5_scaffold_111_29

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 27895..28722

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 275.0
  • Bit_score: 558
  • Evalue 6.10e-156
dapF; diaminopimelate epimerase DapF (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 273.0
  • Bit_score: 436
  • Evalue 7.00e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 828
ATGAAATTTTATAAAATGCAGGGAGCAGGAAATGATTTTGTATTTGTAGAAGATTTTAATAATGAAATAAATGATGAATGTAGTCTAGCTGTTAAGCTTTGTGATAGACATTATGGAATTGGTGCAGATGGTCTTGTCATTGTGAGAAAGTCTCAAGTTGCAGAAGCAAAAATGATAATAATTAATGCAGATGGATCAAGGGCAAATATGTGTGGTAATGCAATAAGATGTTTTGGAAAATATGTGTTTGAACATAATATAGTAAATAAAACAGAATTTTCAGTGGAGACTGGTGATGGTGTTAAAATTATAGAAGTATTACTTGAAGATGAAAAAATTAAATATGTAAAAGTTTATATGGGTAAGCCTTCATATAGAGCAGAAGATATTCCATTAAGTCATGGAGAAGATTTTATAGATAGTGAAATCACATGTAATGGGAAAACATATAAAGCAACTACAGTTTTAGTTGGTGTTCCTCATACAATTATTTTTGAAAATACAGATGAATATGTTGTTAATGAAGATGGACCTTCTTTAGAAAAACACAGTCTTTTTACTGAAGGAAGCAATATTAATTTTGTAAAGATAATAGATGATACACATATAAGAGTTAATACTTGGGAAAGAGGTGCAGGAGCAACACTTGCATGTGGAACTGGCTGTTCAGCATCAGTAGTAGTCGCAAAAAAATTAGGATTAGTCAATAAAGAAAAAGAGATTTATGTAAAAGCACCTGGCGGTGAACTTATAATTGAAGTTAATGGGGATGATGTATATATGAAAGGACCAGCTGAAGTGGTTTTTGAAGGAAATACTTTAATTTAA
PROTEIN sequence
Length: 276
MKFYKMQGAGNDFVFVEDFNNEINDECSLAVKLCDRHYGIGADGLVIVRKSQVAEAKMIIINADGSRANMCGNAIRCFGKYVFEHNIVNKTEFSVETGDGVKIIEVLLEDEKIKYVKVYMGKPSYRAEDIPLSHGEDFIDSEITCNGKTYKATTVLVGVPHTIIFENTDEYVVNEDGPSLEKHSLFTEGSNINFVKIIDDTHIRVNTWERGAGATLACGTGCSASVVVAKKLGLVNKEKEIYVKAPGGELIIEVNGDDVYMKGPAEVVFEGNTLI*