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NECEvent2014_6_5_scaffold_1346_5

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 3004..3471

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 155.0
  • Bit_score: 265
  • Evalue 9.30e-69
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 155.0
  • Bit_score: 307
  • Evalue 1.10e-80

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 468
ATGAGAATTGGAATGGGATATGATGTTCATAAATTAGTTGAAGATAGAAAACTAATAATTGGAGGAGTTGAAATCCCTTTTGAAAAAGGTCTTTTAGGTCATTCTGATGCCGATGTCCTTCTTCATGCTATAATGGATTCACTGCTTGGTGCATGCGCTTTAGGCGATATTGGAAGACATTTTCCAGATACAGATATAAAATATAAAGGAATATCAAGCATAAATTTACTTGAAGAAACAGGACGAATTATTTTTGAAAATGGATATTCTATTAACAATATCGATGCTACAATAATTGCACAAAAGCCAAAAATGAGTCCACATATTGAGACTATGAGAAAAAACATAGCTAAAGCACTTAATATTGATATTAACCAAATTAATATTAAAGCTACAACAGAAGAAGGTCTTGGATTTACTGGAGAAATGCTTGGGATTTCTGCTCAAAGCATAGCTTCTGTTAACTAA
PROTEIN sequence
Length: 156
MRIGMGYDVHKLVEDRKLIIGGVEIPFEKGLLGHSDADVLLHAIMDSLLGACALGDIGRHFPDTDIKYKGISSINLLEETGRIIFENGYSINNIDATIIAQKPKMSPHIETMRKNIAKALNIDINQINIKATTEEGLGFTGEMLGISAQSIASVN*