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NECEvent2014_6_5_scaffold_509_9

Organism: NECEvent2014_6_5_Clostridium_perfringens_28_32

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(7896..8597)

Top 3 Functional Annotations

Value Algorithm Source
sigK; sporulation sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 453
  • Evalue 2.80e-125
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 453
  • Evalue 1.40e-124

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 702
ATGTTCATGTTACAATACTTATTAGAATTAGTTGGTAGTAAAATATTTTTAACTGGCTATGTAACAGGAAATTCTACTTTTCCAAAGCCTTTAAATGAGAAGGAAGAAAAAATCTATTTAGAAAGATTAAAAGATGGAGATGTTGAGGCAAAAAGAGTACTAGTTGAGCGGAATTTAAGACTAGTAGCACATATAGTTAAGAAATATTCTTCAAATTATCAAAACTCAAAAGAAATGGATGATTTAATATCTATAGGAACAATAGGTTTAATAAAGGCTATAGATTCTTTTGACACTAACAAGGGAATACGACTTGCAACATATGCAGCTAAGTGTATAGACAATGAAATACTTATGTTTTTTAGGAATACTAAGAAGACAAAGGGAGAAGTATTCCTTCAAGATCCTATAGGAGTAGATAAGGAGGGTAATGAAATTTGTCTCATAGATATTTTAAGTAGTGACTCTGATTCGGTATTAGAGGCTGTTGAAAATTCATTACAGGTTAAGGAGCTTTATAAAAAGATGTCTGATGTCTTAAGTCCTAGGGAGAAAGAGATAATTCAAATGAGATACGGTCTTTTAGATGGTGATATAAAAACACAGAGGGAAATAGCGGGAATTCTTGGTATATCAAGATCATATGTATCTAGAATAGAAAAAAAGGCACTAAAAAAATTAAATAAGGAATTTAAATGTTAA
PROTEIN sequence
Length: 234
MFMLQYLLELVGSKIFLTGYVTGNSTFPKPLNEKEEKIYLERLKDGDVEAKRVLVERNLRLVAHIVKKYSSNYQNSKEMDDLISIGTIGLIKAIDSFDTNKGIRLATYAAKCIDNEILMFFRNTKKTKGEVFLQDPIGVDKEGNEICLIDILSSDSDSVLEAVENSLQVKELYKKMSDVLSPREKEIIQMRYGLLDGDIKTQREIAGILGISRSYVSRIEKKALKKLNKEFKC*