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NECEvent2014_6_5_scaffold_2525_2

Organism: NECEvent2014_6_5_Clostridium_7_2_43FAA_28_9

near complete RP 48 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(1543..2112)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 189.0
  • Bit_score: 377
  • Evalue 1.30e-101
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 192.0
  • Bit_score: 299
  • Evalue 5.40e-79

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 570
ATAATGTATATCTTAAAGCTAGCTCACTTAGTTGACGATAAGATCCATGCAAGATCAACAGGTCCATATTCATTAGTAACTCAACAACCACTTGGTGGTAAAGCACAATTCGGTGGTCAAAGATTTGGAGAAATGGAAGTTTGGGCTTTAGAAGCATATGGAGCAGCTCACACACTACAAGAAATATTAACTGTTAAATCAGATGATGTTGTAGGTAGAGTTAAAACATATGAAGCTATTGTTAAGGGTGAAAACATACCTGAACCTGGAGTTCCTGAATCATTTAAGGTTCTAATTAAAGAACTTCAAGCTTTATGTTTAGATGTAAAAGTGTTAAATGATGAAAATGAAGAAGTTAGACTTAAAGAATTTGCAGAAGAAGATATGGAAGATTTAGAAGTTAATATTGAAGGAACAGAAGATGTTGTTTCAGAAGATGTTAATGTAGATGATAGTTATACAACATCAGAGGAAGAAATTGAGGAAGAAGTTGAATTTGACAACTTTGCTTTAGATGGATTCCATGAGGAAGACTTAGAACTTGATGATTTTGTAAATGATGAACACTAA
PROTEIN sequence
Length: 190
IMYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDVKVLNDENEEVRLKEFAEEDMEDLEVNIEGTEDVVSEDVNVDDSYTTSEEEIEEEVEFDNFALDGFHEEDLELDDFVNDEH*