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NECEvent2014_6_5_scaffold_3205_1

Organism: NECEvent2014_6_5_Clostridium_7_2_43FAA_28_9

near complete RP 48 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: 3..587

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 389
  • Evalue 2.70e-105
rluB; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 194.0
  • Bit_score: 367
  • Evalue 2.20e-99

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 585
ATTATATATGGAAAAGACATTATAAAAGTAGATGGGAATATTATAAAACCAGAAAAAAATAAAATCTACATTTTACTTAACAAACCAAAAGGATATGTATGTACTGCTAAAGATGAAAAGGGCAGAAAAACTATTTTAGATTTAGTAAAAGTTAAAGAAAGAGTATACCCTATAGGCAGGTTAGATATGGACACATCAGGTATAATAATACTTACCAATGACGGAGAAATATACAATAAGATTATTCATCCTAAATTTGAAAAAGTAAAGACTTATAAAGCTAAAGTAAAAGGAACTATAAAAAAAGATCATATAGAGTTGTTTAAAAAGGGCATAGATATAGGAGATTACATAACAGCTCCAGCGGCATTAGAAATTTTAAAAACAAATAAGGATACTTCTGAAATAATAATAAAAATTCACGAGGGTAAAAATAGACAAGTAAGAAAAATGTGTAAATCTATAGGCCATCCCGTTATAGATTTAGATAGAATTTCTATAGGTAATATATCAAAAGGTGATTTGAAATTAGGTGAGTGGAGATACCTAACTAAGAAGGAAATAGAGTATATAATTAAAATATGA
PROTEIN sequence
Length: 195
IIYGKDIIKVDGNIIKPEKNKIYILLNKPKGYVCTAKDEKGRKTILDLVKVKERVYPIGRLDMDTSGIIILTNDGEIYNKIIHPKFEKVKTYKAKVKGTIKKDHIELFKKGIDIGDYITAPAALEILKTNKDTSEIIIKIHEGKNRQVRKMCKSIGHPVIDLDRISIGNISKGDLKLGEWRYLTKKEIEYIIKI*