ggKbase home page

NECEvent2014_6_5_scaffold_3823_2

Organism: NECEvent2014_6_5_Clostridium_7_2_43FAA_28_9

near complete RP 48 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: 614..1291

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 226.0
  • Bit_score: 442
  • Evalue 4.00e-121
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199) similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 226.0
  • Bit_score: 376
  • Evalue 4.20e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 678
ATGGAATTTAAACATGTATCGGTACTTTTAAATGAGTGCATAGAGGGATTAAATATTAAAGAAGATGGAATATATGTTGATGGAACACTTGGAGGAGGGGGACATTCTTTAGAAATCTTAAAAAGGCTATCAAAAGATGGAACTTTAATAGGTGTAGATCAAGATAAAGATGCGCTTAAAGCAGCAGGGGAAAGGTTACAAGATTTTGCAAATGTAAAGTTTGTCCATAGTAATTTTTATAATATTGATTCAGTTTTAAATAACTTAGAAATAGAAAAAATAGATGGAATGCTTATGGACCTTGGTGTGTCATCTTATCAATTAGATGAAGGTGATAGAGGATTTAGCTATATGCAAGATGCCCCTTTAGATATGAGAATGAATAGAGAAAATTCTTTATCTGCATATGAAGTTATAAATGAATATGAAGAGGAAGAAATTTATAGAATAATTAGAGATTATGGTGAAGAAAAATTTGCTAAAAGAATCGCAAGATTTATAGTAGAAAACAGAGAAAATAAACCAATAGAAACTACCTTAGAGTTAGTAGAAATAATAAAAGCTGCTATACCTGCTAAGGCTAGAAGAGAAGGACCACATCCAGCAAAAAGAACTTTTCAAGCTATTAGAATAGAAGTGAATAGTGAATTATCTATATTAAATAAGGCAATTGAAGAT
PROTEIN sequence
Length: 226
MEFKHVSVLLNECIEGLNIKEDGIYVDGTLGGGGHSLEILKRLSKDGTLIGVDQDKDALKAAGERLQDFANVKFVHSNFYNIDSVLNNLEIEKIDGMLMDLGVSSYQLDEGDRGFSYMQDAPLDMRMNRENSLSAYEVINEYEEEEIYRIIRDYGEEKFAKRIARFIVENRENKPIETTLELVEIIKAAIPAKARREGPHPAKRTFQAIRIEVNSELSILNKAIED