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NECEvent2014_6_6_scaffold_3350_4

Organism: NECEvent2014_6_6_Clostridium_paraputrificum_30_161

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 1973..2557

Top 3 Functional Annotations

Value Algorithm Source
lytF; endopeptidase LytF (EC:3.4.-.-) similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 187.0
  • Bit_score: 180
  • Evalue 6.40e-43
Endopeptidase LytF n=1 Tax=Clostridium intestinale URNW RepID=U2Q031_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 187.0
  • Bit_score: 189
  • Evalue 3.80e-45
Endopeptidase LytF {ECO:0000313|EMBL:ERK32100.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 187.0
  • Bit_score: 189
  • Evalue 5.30e-45

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Taxonomy

Clostridium intestinale → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 585
ATGATTTCAAAAAGAAAGATACTTACTAAGGCTGTAGCTATTACAGTTGTATGTGCAGCAGTTGCAATGGTAGGTGCAGAAAGTATAAGCGCAGATACAAGTGCAAAGACAAAACAGGGTGTAGTACTTAAGACAAGTGAACTTAAGGTTAATAAAGTAATTGTGTCACCTAAAAAGGTTGAAGAACAAAATACCGTACAACCTTCAAGATCATCAAACACAACAGGTAAGAAAAATACAAGTTCTTCTATAAACAGAGGAGTGAACAAGTCATCAAGCCAAGTAGCAAATTATGCTTATAACTTCTTAGGAAGACCATACGTATATGGTGCAAATGGACCAAATGCATTTGATTGTTCTGGCTTTACAAGTTATGTATATAGACATTTTGGGGTTAGTTTACCACGTACAGCTAGCTCACAATTTAGTGCAGGAAGTGCAGTGTCAAGAAATAATTTAGCGCCTGGAGACTTAGTGTTCTTCAATACAGTAGGATACTTAGGTCATGTTGGTTTATACATTGGTGGCGGTGATTTTATACATGCAGCATCAAGTGGTAGGGTAGAGATTTTTTTTATTCTTTAG
PROTEIN sequence
Length: 195
MISKRKILTKAVAITVVCAAVAMVGAESISADTSAKTKQGVVLKTSELKVNKVIVSPKKVEEQNTVQPSRSSNTTGKKNTSSSINRGVNKSSSQVANYAYNFLGRPYVYGANGPNAFDCSGFTSYVYRHFGVSLPRTASSQFSAGSAVSRNNLAPGDLVFFNTVGYLGHVGLYIGGGDFIHAASSGRVEIFFIL*