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DORA_VCM_1_33

Organism: DORA_Varibaculum_cambriense

near complete RP 51 / 55 MC: 14 BSCG 48 / 51 ASCG 13 / 38
Location: comp(40773..41210)

Top 3 Functional Annotations

Value Algorithm Source
Large-conductance mechanosensitive channel n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W283_9ACTO (db=UNIREF evalue=5.1e-35 bit_score=153.0 identity=58.5 coverage=89.04109589041096) similarity UNIREF
DB: UNIREF
  • Identity: 58.0
  • Coverage: 89.0
  • Bit_score: 153
  • Evalue 5.00e+00
Large-conductance mechanosensitive channel {ECO:0000313|EMBL:ETI82452.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambrie UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 145.0
  • Bit_score: 280
  • Evalue 9.90e-73
mechanosensitive ion channel protein MscL similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 135.0
  • Bit_score: 139
  • Evalue 9.40e-31

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGAGTAAAGACAATACTGGTTTCATTGCTGGATTCAAAGAATTTATTTCCCGTGGAAACGCCATCGACCTAGCAGTTGGGGTTGTTATTGGTGCCGCTTTTGGCGCAGTAGTCACCGCCATCGTTGACAAATTCATTAACCCGCTAATTGCAGGGCTAGTGGGTAAACCTAACTTCGATAATGTTTTAGAGTTCCATCTCGGTAACGCTACCGTGCAACCGGGAGCGATTATTACCGCCCTGGTTAACTTCCTGCTAGTCGCCCTGGCGATTTATACCTGCATTATTGTGCCGATGAATAAGCTCATGCGGATGCGTGACGCTAAAGCTAAAGCCGATGAAGAAGCCGAAGAACCCAAAGCAGATCCCCAAGTGGAACTGCTAACCGAAATCCGCGACCTCCTACAATCCGAAAAATCCGCCTCCCAAAATAGTTAA
PROTEIN sequence
Length: 146
MSKDNTGFIAGFKEFISRGNAIDLAVGVVIGAAFGAVVTAIVDKFINPLIAGLVGKPNFDNVLEFHLGNATVQPGAIITALVNFLLVALAIYTCIIVPMNKLMRMRDAKAKADEEAEEPKADPQVELLTEIRDLLQSEKSASQNS*