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NECEvent2014_6_7_scaffold_683_6

Organism: NECEvent2014_6_7_Veillonella_atypica-rel_39_391

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(3874..8079)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2747
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZMI2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2748
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 999.99
  • Bit_score: 2656
  • Evalue 0.0

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Taxonomy

Veillonella sp. ICM51a → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4206
GTGCTAGACGTAAATGAATTTGATTCCATGCGAATCGGTTTAGCCTCTCCAGAGCAAATTTTAGAATGGTCTCATGGGGAAGTTAAAAAACCAGAAACAATTAACTACCGTACGTTAAAGCCAGAACGTGATGGTCTATTTTGCGAACGCATTTTTGGACCAACAAAGGACTGGGAATGTCACTGCGGTAAATATAAACGCATCCGCCATAAAGGCGTTGTCTGCGATAAATGTGGCGTAGAAGTAACACGTGCTAAAGTGCGTCGTGAACGTATGGGCCATATCCAATTGGCTACACCTGTATCCCATATTTGGTACTTCAAGGGTATCCCATCTCGTATGGGCCTTATCCTTGATGTATCTCCACGTTCCTTGGAACGCGTATTGTATTTTGCTTCCTATATCGTAGTTGATCCTGCAGGTAGCCCATTGGCAAAACGCCAATTGTTATCTGAACAAGAATACCGTGAATACGAAGCTCAATTCAATGAAGAAGGATATACTATCGGTGGTAAATCCGTAGTTATTGAAACTGTGGCACAACGTAATGAACGTTTGGCTATCGTTCGTGAAGCACAACGTAAAGAACGTTATAATGCAGCACTTCGTGAAGATGCTACAATTCCAGAAGCTGATAAAGAATATGAAGAATTAACTCGTGAAGAACGTTACGAATTAGGTGCTACAGAAGAAATCTTATTCGTATGTATCGACATGGGTGCAGAAGCGGTAAAAGCATTATTATCTGAACTTGATTTAGAACAATTAAATGCTGAATTGCGCGAAGAGTTGAACACTGCAAGTGGTCAACGTAAAATCCGTGCCGTTCGCCGTCTTGAAGTAGTAGAAGCATTCCGTCAATCTGGCAATCGCCCAGAATGGATGATTATGGATGTCGTTCCTGTTATCCCACCTGAATTGCGCCCTATGGTTCAATTAGATGGTGGTCGCTTTGCTACATCTGACCTTAATGATTTGTATCGTCGTGTTATCAATCGTAACAACCGTTTGAAACGTTTGTTGGACTTAGGTGCTCCTGATATCATCGTGCGCAATGAAAAACGCATGTTGCAAGAAGCGGTTGATGCATTGATTGATAATGGTCGTCGTGGCCGTCCTGTTACAGGTCCTGGTAATCGCCCATTAAAATCCTTGTCCGATATGCTTAAAGGTAAACAAGGTCGTTTCCGTCAAAACTTGCTCGGTAAACGTGTTGACTACTCCGGTCGTTCCGTTATCGTAGTAGGTCCAGAACTTAAAATGCATCAATGTGGTTTGCCTAAAGAAATGGCATTGGAATTGTTCAAGCCATTCGTTATGAAACGCTTGGTAGAACGTGGACAAGCATCCAATATTAAGGCTGCTAAGCGCCAAGTAGAACGCGTAGGTCCTGGTGTATGGGAATCCTTGGAAGAGGTTATCAAAGAACATCCAGTTCTTTTGAACCGTGCCCCTACATTGCATAGACTTGGTATCCAAGCCTTCGAACCAATCCTTTGGGAAGGCCGTGCTATCAAATTGCATCCATTAGTATGTACAGCCTTTAATGCCGACTTTGACGGTGACCAAATGGCTTGTCATTTACCATTGTCCGTAGAAGCTCAATCCGAAGCTCGTACATTGATGCTATCCGTTCATAATATCTTATCAACAAAAGATGGTAAGCCAGTTGCTATTCCATCTCAAGATATGATTTTGGGTACTTATTACCTAACAGTTGTACGCGAAGATACTCGTGATAAAGCAAAAACATTTGCTACATATGACGAAGTAATGCTTGCTTACGATTCTCATGTTATCGGATTGCAAGATATTTTATACATTCGCTTGCCTGAACACGGTCGCGTAGAAACTACAGCTGGTCGTTTGATCTTTAACAACGCTTTGTTCCCAGAATTATGGCAATATGAACAAAAAGAAGACGGTACTTACACATTGGGTAAGGTTATGGATAAGAAGACGGTTGGTAAACTTGTAGATCAATGTTTCCAATTATTCGGCAATGAAAAAACTGCTGAACTCTTAGACAGAATTAAATCCCTTGGTTACTCCTTTGCACGTCGTGCAGGTATGACAGTAGCCATTGCGGATATTAAAGTACCAGAAGAAAAATTCGATTTACTTGATACTGCAGAACAAGAAGTAGAAAAAGTATCTCGTCTATATCGCCGTGGTCTTATTACAGAAGAAGAACGTTATCGTAAAACAATCCAATTGTGGACAAAAGCAACAGAAGATGTTACTGATGCCATGATGGATAATATGGCGCGCGATAAAGATGGCTTCAACCCTGTATATATGATGGCTATCTCCGGTGCCCGTGGTAACAAACAACAAATTCGTCAGCTTGCTGGTATGCGTGGTTTGATGGCTGACCCATCTGGTCGTATCATCGACTTGCCAATCAAGGCAAACTTTAAAGAAGGTTTGACTGTATTGGATTACTTTACGTCCTCTCATGGTGCTCGTAAAGGTTTGGCCGATACAGCACTTCGTACAGCTGACTCCGGTTATTTGACTCGTCGTCTTGTTGACGTATCTCAAGACGTTATCGTTCGTGAGGACGATTGTGACGTTGTAGGTATCGATCTCGTTCGTGAACGCGCTCGTTTGGCTACATCTCCACGTCAAGCTCTTGAAATGTTGAAAGACAAATTGATTGGCCGCGTTCTCGATAAAGATGTAGTAAATGCTGAAACAGGTGAATTAGCTGTTCCTGCAGAAACTATTCTTGATGAACAAAGCTTAGCAGATATCGCAGATGCTGGTGTAACAGCTATCTCCTTACGCGGTGCACATTTAGGCTCTGATAGCGATATTAACCATACTAATTTGGTACAAAAGATCCTTCTTGGTGAAAGCGACGATAGTATCCGTGCAACATTAAAAGAAACTATGGTTCAAAATATGTTGAACAAGGATACTGTGAATGCTATCGTGGACAGCAATGGCGTAGAAATCTACCCTGCTGATACACGCCTTACAGAAGAAGGTATCGAAGCAATTCTAAACTCTGATGTAAAAGAGGTACAAGTACGCAATAATGAAATCAACGGTATTGAAGTAGAAGCTATCGTTGAAGGTACGGGTATTATTGAACCATTGAAAGACCGTATCGTAGGTCGTATTGCAGCTGAAGAATTAATCAATAAGGAAACTGGTGAAGTTATCGTTCCATTGAATGGTGAAATTACTGAAGAACTTGCTGATGAAGTTGTAAAACATTACGATGTTGTTAAAATCCGTTCCGTATTGACTTGTCGCAGCCCTTATGGCGTATGCCGTAAGTGCTATGGTCGTGACCTTGGTACAGGTGACCAAGTTCAAGTCGGTGAAGCAGTTGGTATCATTGCGGCTCAATCCATCGGTGAACCTGGTACACAATTGACAATGCGTACATTCCATACAGGCGGTGTCGCAGGTGACGATATCACACAAGGTTTGCCTCGTGTTGAAGAATTGTTCGAAGCTCGTAAACCAAAACGTAATGCAATCATTGCTGAAAATGAAGGTGTAGTACGTGTTGTACCTAACGAAGGTAAAAAAGGTACTAATACTATCTTTATTACAGGTGAAGATGGTATTGAACTCGATTACCTCATCCCTTATGGTTCTCGCATTATCGTTAAAGACGGTGATGTTGTATCCTTGGGCGCACGTTTGACAGAAGGTTCCATTAATCCTCATGACATCATGCGTGTAATGGGCACACAAGCAACACAACGTTACCTCGTATACGAAGTACAAAAAGTATATAAATCTCAAGGTGTAGAAATCAACGATAAACACATTGAAGTTATTGTTCGTCAAATGCTTCATAAGGTTAAAATCGAAACTGCTGGCGATGCAGATATGCTTCCTGGCGACATGATTGATATCAACACATTTGATGAAGAAAATCGCCGTTTAACATTGAATGGCCGTGAAAATGCTACTGGTAAACGTACATTGTTGGGTATTACTAAAGCTGCGTTGGCTACAGATTCCTTCTTGTCTGCTGCATCATTCCAAGAAACTACACGTGTTCTTACAGATGCTGCTATTAAGGGCAAAATCGATCCATTATTGGGTCTTAAGGAAAATGTTATCATCGGTAAATTGATTCCTGCCGGTACTGGTATGAGCCGTTACCGTAAAATTGAAGTAGTTAAAAAGGCTCCTGAAATTTTGGAATTAACTGATGACGGTGAAATCATAGAAAAATAA
PROTEIN sequence
Length: 1402
VLDVNEFDSMRIGLASPEQILEWSHGEVKKPETINYRTLKPERDGLFCERIFGPTKDWECHCGKYKRIRHKGVVCDKCGVEVTRAKVRRERMGHIQLATPVSHIWYFKGIPSRMGLILDVSPRSLERVLYFASYIVVDPAGSPLAKRQLLSEQEYREYEAQFNEEGYTIGGKSVVIETVAQRNERLAIVREAQRKERYNAALREDATIPEADKEYEELTREERYELGATEEILFVCIDMGAEAVKALLSELDLEQLNAELREELNTASGQRKIRAVRRLEVVEAFRQSGNRPEWMIMDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMHQCGLPKEMALELFKPFVMKRLVERGQASNIKAAKRQVERVGPGVWESLEEVIKEHPVLLNRAPTLHRLGIQAFEPILWEGRAIKLHPLVCTAFNADFDGDQMACHLPLSVEAQSEARTLMLSVHNILSTKDGKPVAIPSQDMILGTYYLTVVREDTRDKAKTFATYDEVMLAYDSHVIGLQDILYIRLPEHGRVETTAGRLIFNNALFPELWQYEQKEDGTYTLGKVMDKKTVGKLVDQCFQLFGNEKTAELLDRIKSLGYSFARRAGMTVAIADIKVPEEKFDLLDTAEQEVEKVSRLYRRGLITEEERYRKTIQLWTKATEDVTDAMMDNMARDKDGFNPVYMMAISGARGNKQQIRQLAGMRGLMADPSGRIIDLPIKANFKEGLTVLDYFTSSHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCDVVGIDLVRERARLATSPRQALEMLKDKLIGRVLDKDVVNAETGELAVPAETILDEQSLADIADAGVTAISLRGAHLGSDSDINHTNLVQKILLGESDDSIRATLKETMVQNMLNKDTVNAIVDSNGVEIYPADTRLTEEGIEAILNSDVKEVQVRNNEINGIEVEAIVEGTGIIEPLKDRIVGRIAAEELINKETGEVIVPLNGEITEELADEVVKHYDVVKIRSVLTCRSPYGVCRKCYGRDLGTGDQVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKPKRNAIIAENEGVVRVVPNEGKKGTNTIFITGEDGIELDYLIPYGSRIIVKDGDVVSLGARLTEGSINPHDIMRVMGTQATQRYLVYEVQKVYKSQGVEINDKHIEVIVRQMLHKVKIETAGDADMLPGDMIDINTFDEENRRLTLNGRENATGKRTLLGITKAALATDSFLSAASFQETTRVLTDAAIKGKIDPLLGLKENVIIGKLIPAGTGMSRYRKIEVVKKAPEILELTDDGEIIEK*