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NECEvent2014_6_7_scaffold_2609_4

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(2397..2927)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=8 Tax=Clostridium difficile RepID=G6BST4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 352
  • Evalue 2.30e-94
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 352
  • Evalue 6.60e-95
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAJ70547.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 352
  • Evalue 3.30e-94

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 531
CCTAATATATCTATGGATATTTGTACTAATGAAATAACCGAACTTTTAAACTTAGTAAAAAATAATTCTATGGACCTCGCTTTTGTTATTAATCCAGAAAATCAACCATTAAAAGATTTTGAATATAAAACTGTAGAAAGATATTCTTTGGTAGCTCTTTTACCTCCTGGTCATCCACTTTACAATGAGGATTCTATCGATTTAATTGAATTACAACATGATAAATTTATTTTTGTAAAAGAAACAGGGGATGAGTATGGACAAAAGTCAATGATACAGAATAGATATCGTGAAGCAGGGTTTGTACCTAATGTGGTACAACGTTCAAATAATCTTAATACTATTGAATCATTGGTATCTTCTAACATGGGAATATCCATTTTACCTTCATTTTGTGTTACAGATACAATGATAGAACGTGATATTGCAATAGTACCTATAAAAGAAGTAGAAAATAGAATTGAAGTTGTAGTTGTATGGAATAAAAAAAATACAAATCCAGCATTAGAAAAGTTCATTTCTATAATATAA
PROTEIN sequence
Length: 177
PNISMDICTNEITELLNLVKNNSMDLAFVINPENQPLKDFEYKTVERYSLVALLPPGHPLYNEDSIDLIELQHDKFIFVKETGDEYGQKSMIQNRYREAGFVPNVVQRSNNLNTIESLVSSNMGISILPSFCVTDTMIERDIAIVPIKEVENRIEVVVVWNKKNTNPALEKFISII*