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NECEvent2014_6_7_scaffold_3755_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 314..1924

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 537.0
  • Bit_score: 1056
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=6 Tax=Clostridium difficile RepID=C9XII3_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 537.0
  • Bit_score: 1056
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 537.0
  • Bit_score: 1056
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1611
ATGCCACATCCTGTCACGATAGGTAAAAGAACTAGAATGAGCTTTTCTAAAATTAAGGAAATAGCTGATGTGCCAAATCTTATAGAAATTCAAGTAGATTCCTATGAGTGGTTTTTAAAAGAAGGTTTAAAAGAAGTGTTTGATGATATTTCACCAATAGAAGATTATACTGGTAATCTTATATTGGAATTTGTCGACTATTCTCTAGATGATAAACCAAAGTACGATATAGAAGAGTGTAAAGAGAGAGATGCTACATATTGTGCACCTCTAAAGGTTAAGGTAAGACTTATAAATAAAGAAACAGGTGAGATAAAAGAACAAGAAGTGTTTATGGGTGACTTCCCTTTAATGACAGAAAGAGGAACTTTCGTTATAAATGGAGCAGAAAGAGTTATAGTAAGTCAATTAGTTAGATCTCCTGGTGTTTACTATGCGGAAGAAAGAGATAAAACAGGTAAGAGATTGATTTCATCTACTGTAATTCCTAATAGAGGAGCATGGTTAGAATATGAAACAGATTCTAATGATGTAATATCTGTAAGAGTTGATAGAACAAGAAAACAACCAGTTACAGTTTTACTTAGAGCTTTAGGAATAGGAACAGATGCAGAGATAATTGACCTTTTAGGAGAAGATGAGAGATTATCTGCTACATTAGAAAAAGATAATACTAAGACAGTAGAAGAAGGTCTTGTAGAGATATACAAAAAATTAAGACCAGGTGAACCTCCTACTGTAGAAAGTGCATCATCTTTATTAAATGCTTTATTCTTTGACCCAAAAAGATATGACCTAGCAAAAGTTGGTAGATATAAATTCAATAAGAAACTTGCTTTATGTTATAGAATAATGAATAAAATTTCAGCAGAAGACATAATAAATCCAGAAACTGGAGAAGTATTTGTAAAAGCTGGAGAAAAAATAAGCTATGATTTGGCTAAAGCCATACAAAATGCAGGTATAAATGTAGTAAATCTACTAATGGATGATGATAAAAAAGTTAGAGTTATAGGAAATAATTTTGTGGATATTAAGTCTCACATTGATTTTGACATAGATGATTTAAACATAAAAGAAAAAGTACATTATCCAACTTTAAAAGAAATTTTAGATGGATATAGTGATGAAGAAGAAATAAAAGAGGCTATAAAATCAAGAATTAAAGAACTTATACCAAAACATATATTATTAGATGATATAATAGCTTCAATAAGTTATGAGTTCAATATATTCTATAATATAGGAAATATTGATGATATAGATCACCTAGGAAACAGAAGAATAAGATCTGTAGGTGAATTGTTACAAAATCAAGTTAGAATTGGTCTTTCAAGAATGGAAAGAGTTATAAAAGAAAGAATGACGGTTCAAGATATGGAAGCTATAACGCCTCAAGCGTTAGTTAACATAAGACCAGTTTCAGCTGCAATAAAAGAATTTTTTGGTAGTTCTCAGTTATCTCAGTTCATGGATCAAACAAATCCTCTATCTGAGTTAACGCATAAGAGAAGATTATCAGCCCTTGGGCCTGGAGGTCTTTCAAGAGAAAGAGCTGGATTCGAAGTGCGTGACGTTCCCCATTCACACTATGGTAGAATGTGTCCAATA
PROTEIN sequence
Length: 537
MPHPVTIGKRTRMSFSKIKEIADVPNLIEIQVDSYEWFLKEGLKEVFDDISPIEDYTGNLILEFVDYSLDDKPKYDIEECKERDATYCAPLKVKVRLINKETGEIKEQEVFMGDFPLMTERGTFVINGAERVIVSQLVRSPGVYYAEERDKTGKRLISSTVIPNRGAWLEYETDSNDVISVRVDRTRKQPVTVLLRALGIGTDAEIIDLLGEDERLSATLEKDNTKTVEEGLVEIYKKLRPGEPPTVESASSLLNALFFDPKRYDLAKVGRYKFNKKLALCYRIMNKISAEDIINPETGEVFVKAGEKISYDLAKAIQNAGINVVNLLMDDDKKVRVIGNNFVDIKSHIDFDIDDLNIKEKVHYPTLKEILDGYSDEEEIKEAIKSRIKELIPKHILLDDIIASISYEFNIFYNIGNIDDIDHLGNRRIRSVGELLQNQVRIGLSRMERVIKERMTVQDMEAITPQALVNIRPVSAAIKEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVPHSHYGRMCPI