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NECEvent2014_6_7_scaffold_4230_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 3..395

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EQE60820.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQE60820.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 261
  • Evalue 7.30e-67
RNA methyltransferase, RsmD family n=203 Tax=Clostridium difficile RepID=T3GHV2_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 261
  • Evalue 5.20e-67
rna methyltransferase, rsmd family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 261
  • Evalue 1.50e-67

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 393
TTAGGAATAGAGTGCTTATCTAGGGGTGCCAAGTCATGTACTTTTGTAGATATCAGTAAGGAAAGCATAGATATTGTTAAGTCCAATATAAAAAAGGCAAGAGTTGAAAGTGAAAGTATTATTTTAAACCTTGATTTTAAGACTGCAATAGATAAACTTAAATTACAAAATAGTAAATTTGACATAATTTTTATGGACCCTCCGTATTATAAAAATATGTTTATAGAAGCTATTGAAAAAATTGATAATTCTAATCTATTGAACGAAGATGGAATAATAGTTGTAGAACATGATACGAATGATTTATTTCCAGATAAGATATGTAAATTGGAGAAAACTAGAGATAAGAAATATGGAAATACTACATTAACTTTTTATAAGATGGAGGCATAA
PROTEIN sequence
Length: 131
LGIECLSRGAKSCTFVDISKESIDIVKSNIKKARVESESIILNLDFKTAIDKLKLQNSKFDIIFMDPPYYKNMFIEAIEKIDNSNLLNEDGIIVVEHDTNDLFPDKICKLEKTRDKKYGNTTLTFYKMEA*