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NECEvent2014_6_7_scaffold_4231_3

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(1225..1671)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, mannose/fructose/sorbose IIBcomponent (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 290
  • Evalue 2.00e-76
PTS system transporter subunit IIB {ECO:0000313|EMBL:CKH69427.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CKH69427.1};; PTS system, mannose/fructose/sorbose IIBcomponent {ECO:0000313|EMBL:CEJ97018.1}; EC=2.7.1. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 290
  • Evalue 9.80e-76
PTS system sorbose subIIB component family protein n=102 Tax=Clostridium difficile RepID=T3IFQ2_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 290
  • Evalue 7.00e-76

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 447
GATGATAGATTAATACATGGGCAAGTTATTACTGCTTGGTGTAAGATTACATCAGCAAAAAGGATAGTAATCGTGGATGATTTAGTAGTAAAGGACCCATTTATAGTTCAAGTTTTACAAATGGCAGCTCCATCAACTGTTAAGGTTGAAGTACATGATGTAGAATCAGGTGCTGAAGTCTTAAAATCACATAATGGAGATGAAAATTTAATAGTATTGGTCAAATACCCTAAAACTGTCTTAGGTTTAGTAAATAGCGGGGTAGATTTAAAGGAATTGAATGTTGGAGGTATGGGAGCAGGGCTTGGTAGAAAAAGTTTTTATAAAAATATATCTGTGTCAGATGAAGAAAAAGAAATATTTAGAGAGCTAATATCAAAAGATGTTAAATGCTTTATACAAATAGTACCAGATGCAAAGAAAATTGATGTAGGAACATTATTATAA
PROTEIN sequence
Length: 149
DDRLIHGQVITAWCKITSAKRIVIVDDLVVKDPFIVQVLQMAAPSTVKVEVHDVESGAEVLKSHNGDENLIVLVKYPKTVLGLVNSGVDLKELNVGGMGAGLGRKSFYKNISVSDEEKEIFRELISKDVKCFIQIVPDAKKIDVGTLL*