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NECEvent2014_6_7_scaffold_3234_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(3..1748)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclo similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 582.0
  • Bit_score: 1081
  • Evalue 0.0
topB; DNA topoisomerase III; Tn1549-like, CTn4-Orf15 (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 582.0
  • Bit_score: 1055
  • Evalue 0.0
DNA topoisomerase n=1 Tax=Clostridium difficile P28 RepID=T4P6D9_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 582.0
  • Bit_score: 1082
  • Evalue 0.0
  • rbh

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1746
TTGATTTTAGTTATCGCAGAAAAGCCCAGTGTGGCGCAGACAATCGCTGCCGTACTTGGGGCAAAGGAGAAAAAGGACGGATTTCTTACAGGAAACGGCTATGTCGTTTCTTGGTGCGTGGGACATTTGGTAGGGCTTTCCGAAGCTGCCGCCTACGGGGAGCAGTATAAAAAGTGGAGCTATGACAGCCTACCGATTTTGCCGCAGGAATGGAAATACACCGTTGCTTCTGACAAGGAAAAGCAATTCAAGACCTTAAAGGAGCTTATGCACCGGGCAGACATTTCCGAAGTGGTAAACGCCTGCGACGCAGGGCGTGAGGGAGAATTGATTTTCCGCTTTGTCTATGAAGTTGCCGGGTGTAAAAAGCCTATGCGCCGCTTGTGGATTTCCTCAATGGAAGAAGCTGCTATCAAAGAGGGATTTTCTCATCTGAAGAACGGCGAAGCATACGACACGCTCTTTGCTTCCGCACTATGCAGGGCAAAGGCAGACTGGCTTATCGGTATCAATGCCACCCGGCTTTTTTCTGTCCTTTACAACCACACCTTGAACGTAGGACGCGTACAGACCCCGACCTTAAAAATGCTTGTTGACCGGGACGCAGCGATTACCACTTTCAAGAAAGAAAAATACTATCATGTGCGCCTTGCCTTATCCGGCGCGGAAGCTGCAAGTGAAAAAATGTCTGACCGTTCCGAAGCTGACAGGTTGAAAGCTGCTTGCGAAGCGTCAAAAGCAGTCTGTACTTCCCTTGCAAAAGAGAAAAAGACCATTTCCCCGCCGAAGCTCTTTGACCTTACTTCTTTACAAAGGGAAGCAAACCGCCTGTTCGGATATACGGCAAAACAGACCCTTGACCTTGCACAAGCCCTGTATGAAAAGAAGTTCTTGACCTATCCGAGAACGGACAGCGCATTTCTGACCGACGACATGGGCGGCACAGCGGCGGGCATTATCACGCTGCTTTGTGGGAAGTTTTCTTTTATGGAGGGCGCAGACTTCACGCCGGAGCTTTCAAAGGTGCTGAACAGTAAAAAGGTATCCGACCACCACGCCATTATCCCCACTATGGAGCTTGCAAAGACCGACCTTGCCACGCTGCCGGAAAGTGAAAAAAATATCCTTACCCTTGCCGGGGCGCGTCTGCTTATGGCGACCGCCGCAGTACATACCTTTGAAGCGGTTACCGCAGTTTTTGAATGTGCCGGACAGACCTTTGCTGCAAAGGGCAAAACGGTACTTTCTGACGGGTGGAAAGAGATTGACCGAAGATACCGGGCAGCCTTAAAGAACAAGCCCGAAGCAGACGACGCAGACAGCGACACTGGAAATACCCTGCCGCCGTTTACCGAGGGACAGACCTTTGAAAATCCGGCGGCAATGGTAACGGAGCATGACACCACACCGCCAAAGCCCCACAACGAAGCGTCGCTGCTCTCTGCTATGGAGCGCGCCGGAAGTGAGGACACCGACCCGGACGCAGAACGCAAAGGGCTTGGAACTCCCGCCACCCGCGCCGCCGTCATTGAAAAACTGGTAAAGGGCGGCTTTGTGGAACGAAAAGGCAAGCAGCTATTTCCCACAAAAGACGGTATCAACCTTGTTTGCGTCCTGCCGGACACCTTGACAAGCCCGCAGCTTACCGCTGAATGGGAAAACAATCTGACGCAGATAGCAAAGGGCAAGGCAGACCCGGAGGACTTCATGCGGCGTATCAAGGATATGGCGCGGGAACTGGTAAAG
PROTEIN sequence
Length: 582
LILVIAEKPSVAQTIAAVLGAKEKKDGFLTGNGYVVSWCVGHLVGLSEAAAYGEQYKKWSYDSLPILPQEWKYTVASDKEKQFKTLKELMHRADISEVVNACDAGREGELIFRFVYEVAGCKKPMRRLWISSMEEAAIKEGFSHLKNGEAYDTLFASALCRAKADWLIGINATRLFSVLYNHTLNVGRVQTPTLKMLVDRDAAITTFKKEKYYHVRLALSGAEAASEKMSDRSEADRLKAACEASKAVCTSLAKEKKTISPPKLFDLTSLQREANRLFGYTAKQTLDLAQALYEKKFLTYPRTDSAFLTDDMGGTAAGIITLLCGKFSFMEGADFTPELSKVLNSKKVSDHHAIIPTMELAKTDLATLPESEKNILTLAGARLLMATAAVHTFEAVTAVFECAGQTFAAKGKTVLSDGWKEIDRRYRAALKNKPEADDADSDTGNTLPPFTEGQTFENPAAMVTEHDTTPPKPHNEASLLSAMERAGSEDTDPDAERKGLGTPATRAAVIEKLVKGGFVERKGKQLFPTKDGINLVCVLPDTLTSPQLTAEWENNLTQIAKGKADPEDFMRRIKDMARELVK