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NECEvent2014_6_7_scaffold_3260_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(3..1961)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, sigma-54-dependent n=132 Tax=Clostridium difficile RepID=Q18CQ7_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 653.0
  • Bit_score: 1272
  • Evalue 0.0
  • rbh
AAA domain family protein {ECO:0000313|EMBL:EQG78592.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 653.0
  • Bit_score: 1272
  • Evalue 0.0
Transcriptional regulator, sigma-54-dependent similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 653.0
  • Bit_score: 1272
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1959
ATGAAAAAATCAGTAGCTCTGGTAAATGATAGTAGAAAAGATTTAATAGACTTTTTAGAAAATAATTTGAAATTAGTTTTTGGAGATTCTATAAATATTAATAGATACTTCATAAATGAAATAAATGATAATGATATTATAAATGATGATGTGATATTAGTAATGTCAGTAGAAAGATTAGACAAAATTATAAATAATATACTAGATAAGAAAAAAGTGATTGTGGTAAGAAGAACTTTTAGGGAAGATAAAATTTATAATCTACTATCTTTACCACAGGGTACAAATGTTCTAATCGTAAATGATTCTGATGAAACTACTCTAGAAACTATAAGTTTATTTTATAAAATTGGAGTGACTAATATTAGACCAATTCCATATATGAATGATAATAACTATAAAAATATAAAAATAGCTATAACTCCAGGAGTTCCAGAAAAAGTACCTAGCTTTATCTCAGATATATTTGATTTAGGTCACAGATATATAGATATCTCTACATTTATAGAAATAATAAATTTATTACAAATTGATTCAAAGGAAATACAATCTAATCTAGTTAAATACTCAGAAGAAATAATAAGTTTAGATACTGGTATAAAAGATAAATATAAGGAATTATTTTTAAAAATAGAAGAATTAGATACAATCTTGAATTTATCAAAAGATGGTATATTATTTACTTCAAAAGATGGTGAAATAAATACATATAATAGTAAAGTAAAAGATATTTTAGACATAAATGAGGATATATATGGAAAATACATTGAGGATATATTTGTAGATAGTTTAAAAGTTTTATTGAGTGAGAAAGAGATACTAGATAAAGTTGTCGTATTCAATAAGAAATATATAAATGTAAATAAAAAAAACATATACAATAGAGATGAAAAAATGGGCACATATTATAGTTTACAAGAAATAACATACATAAAAAAATTAGAACAAAATCTCACTAAAAAATTAAGAGAAAAAGGACAAATAGCAAAATATACATTTAAGGATATAAAAACAAATAGTCCTAAAATGTTTGAATGTATAGATTTAGCTAAGAAGGTTTCTAAATCTGATTTAAGCATACTTATCAGAGGTGAAAGTGGAACTGGTAAAGAACTCATAGCTCAGTCTATACATAACAACTCAAATAGAAAAAATCAACCCTTTATAGCAGTAAATTGTGCAGCCGTTCCTGAAAATTTATTAGAAAGCCAGCTATTCGGATATGACAAGGGAACTTTTACTGGAGGTCTAAAAGATGGAAAACAAGGATTATTTGAACTTGCTAATAATGGAACAATATTCTTAGATGAAATAGGCGATATGCCTTTAGAATTACAAACAAAACTACTTAGAGTTCTTCAAGAAAAGCAGATAATGCCTGTTGGATCTCACAATGTAATTAATATAGATGTTAGAATCATATCTGCTACAAATAAGAATTTAGAACAAATGATTGATAATAGCCAATTTAGAGAGGATTTATATTATCGATTAAATACAATTCCAATAAATATACCTCCTCTAAGAGAAAGAAAAGAAGACATATTAATTATTATGGAAGATTTAATTAATAAGAAATTAGTAATCACACCAGAAGCAAAAAAACTTATACAAAACTATATGTGGAAAGGTAATATAAGAGAACTCCAAAATGTTACATCCTATTTAAACATTATGTGTGAAGATATTGTATTAGAGAAAGATTTACCTCCAAACTTAAGGTCTTCAGATAACAAAAATACATCATTAAAACTAAAATATAGTAAGAATGATATATTGAATATATTAGAGATACTAATTTTAAATAAGGAATCAGATGTTGGTATTGGTAGAGGATTAATTTTAAAAGCACTACTCGATAAGAACCTTCAAATTACAGAAGGAAAAATTAAAAAAATATTTGAATATCTAAAAAAAGAAGAACTTATAATTTGTAGTTCAGGAAGATATGGAAGTAAA
PROTEIN sequence
Length: 653
MKKSVALVNDSRKDLIDFLENNLKLVFGDSININRYFINEINDNDIINDDVILVMSVERLDKIINNILDKKKVIVVRRTFREDKIYNLLSLPQGTNVLIVNDSDETTLETISLFYKIGVTNIRPIPYMNDNNYKNIKIAITPGVPEKVPSFISDIFDLGHRYIDISTFIEIINLLQIDSKEIQSNLVKYSEEIISLDTGIKDKYKELFLKIEELDTILNLSKDGILFTSKDGEINTYNSKVKDILDINEDIYGKYIEDIFVDSLKVLLSEKEILDKVVVFNKKYINVNKKNIYNRDEKMGTYYSLQEITYIKKLEQNLTKKLREKGQIAKYTFKDIKTNSPKMFECIDLAKKVSKSDLSILIRGESGTGKELIAQSIHNNSNRKNQPFIAVNCAAVPENLLESQLFGYDKGTFTGGLKDGKQGLFELANNGTIFLDEIGDMPLELQTKLLRVLQEKQIMPVGSHNVINIDVRIISATNKNLEQMIDNSQFREDLYYRLNTIPINIPPLRERKEDILIIMEDLINKKLVITPEAKKLIQNYMWKGNIRELQNVTSYLNIMCEDIVLEKDLPPNLRSSDNKNTSLKLKYSKNDILNILEILILNKESDVGIGRGLILKALLDKNLQITEGKIKKIFEYLKKEELIICSSGRYGSK