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NECEvent2014_6_7_scaffold_2916_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(2..511)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=180 Tax=Clostridium difficile RepID=T3GAU0_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 170.0
  • Bit_score: 328
  • Evalue 3.50e-87
  • rbh
Transcriptional regulator, RpiR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 170.0
  • Bit_score: 328
  • Evalue 9.80e-88
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CCK99520.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 170.0
  • Bit_score: 328
  • Evalue 4.90e-87

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 510
ATGAGTTGCATTTTAAAATTAAAACAGATATATGAAGATTTAACGGAAGTAGATAAAAAAATAGCTGATTACATACTTAATAATACAGAGGCTATAAGTAAGCTTTCTGTATCAGAATTGGCGTCAAACTCAAAAACAAGTACAGCAAGTATAGTTAGGTTTTCTAGAAAAATGGGATATTCGGGTTTTGGGGATTTAAAAATTGAGATAGCTAAAGATTTGATGGGCAAAGAAAATGAATACACATATGTAGATGAAAACTATGATTGTAATATAGATAGTGTTATAAACAAAATTACAAACAAAAACATAGAGACTATCAACCAAACAAGGTTGTTGAATGAAAAAGATATAATAAAAGAAGCAGTTGAACAGATAATAAAGGCTAAAAATGTATATATATTTGGAGTAGGTGGTTCGGCTTTAGTTGCACTAGATTTACAGATGAAACTTTTAAGGATAAATAAACAGGCATTTACCTCTTTAGATAGTCATACACAACTTATGGTA
PROTEIN sequence
Length: 170
MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGYSGFGDLKIEIAKDLMGKENEYTYVDENYDCNIDSVINKITNKNIETINQTRLLNEKDIIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMV