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NECEvent2014_6_7_scaffold_6112_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(1..306)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=26 Tax=Clostridium difficile RepID=T2UVB8_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 199
  • Evalue 1.90e-48
phosphosugar-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 199
  • Evalue 5.40e-49
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CCK99555.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 199
  • Evalue 2.70e-48

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 306
ATGATAATTGAGCTAAACAAAAGTAATTCTGAAAATCTAACGAAGACGGAACTTGAAATAATTAAATTTATAAATGAAAATGAATCAATATTACCAGAATTATCTATAGTAGAGATTGCTCATGAAACATATTCATCTCCAGCAACCGTTTCAAGAGCAATTAGAAAATGTGGTTTAAATGGATTCAATGAACTTAGGTATAGATTAACAGTAAAAGATGAAAATGATGATATACAAAATATGGGGGATATAATAAATAAATCCTTTATAGAAGCACAGAGAGTTATAGAACAAATATCTTTAACT
PROTEIN sequence
Length: 102
MIIELNKSNSENLTKTELEIIKFINENESILPELSIVEIAHETYSSPATVSRAIRKCGLNGFNELRYRLTVKDENDDIQNMGDIINKSFIEAQRVIEQISLT