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NECEvent2014_6_7_scaffold_5389_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 1..141

Top 3 Functional Annotations

Value Algorithm Source
Sensory box protein n=1 Tax=Clostridium difficile F253 RepID=T4C1I5_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 46.0
  • Bit_score: 94
  • Evalue 3.00e-17
sigma-54-dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 46.0
  • Bit_score: 94
  • Evalue 8.40e-18
Transcriptional regulator, sigma-54-dependent {ECO:0000313|EMBL:CCL31432.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 46.0
  • Bit_score: 94
  • Evalue 4.20e-17

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 141
GATGCATATAAAATAGTGGACCAAATAATGATAAGTAAGGCTATAAATAAGTATGGTTCAATAACAAAGGCTGCTGAAGTTATAGGTATATATCCTTCTACCATCCATAGAAAGATAAAGAGTGGACATATTCACGTTTAG
PROTEIN sequence
Length: 47
DAYKIVDQIMISKAINKYGSITKAAEVIGIYPSTIHRKIKSGHIHV*