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NECEvent2014_6_7_scaffold_5440_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 3..266

Top 3 Functional Annotations

Value Algorithm Source
PTS system, IIa component n=163 Tax=Clostridium difficile RepID=C9XM92_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 175
  • Evalue 3.30e-41
PTS system transporter subunit IIA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 175
  • Evalue 9.30e-42
PTS system, lactose/cellobiose-family IIA component {ECO:0000313|EMBL:CCL32961.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 175
  • Evalue 4.60e-41

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 264
GTAATGATGTCTCTTAAGGAAATAAAAAAAGGTGACTACAATAAAGCAAAACACCTTTTAAATTCAGCCTCAGAGAAAATACAAACAGCATCAAAGCATCATTTAGAATTACTATCAAATGCTATGAATAGTGAAGATAGTGGGACTGATTTTTTAGTTGTGCACTCTGAAGACCATTATTCAAATGCATTATTTGCTCATTCTTTAGTATCTGAACTTGTAGATATATTTGAGATGATGGACCCAAGAATTAATAAGAATTAA
PROTEIN sequence
Length: 88
VMMSLKEIKKGDYNKAKHLLNSASEKIQTASKHHLELLSNAMNSEDSGTDFLVVHSEDHYSNALFAHSLVSELVDIFEMMDPRINKN*