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NECEvent2014_7_1_scaffold_18_15

Organism: NECEvent2014_7_1_Citrobacter_KTE32-rel_52_45_partial

partial RP 19 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 13709..14305

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 198.0
  • Bit_score: 406
  • Evalue 2.10e-110
Ribosomal RNA small subunit methyltransferase D n=1 Tax=Citrobacter sp. KTE32 RepID=R8V1E9_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 408
  • Evalue 5.30e-111
  • rbh
rsmD; 16S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 198.0
  • Bit_score: 392
  • Evalue 6.40e-107

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Taxonomy

Citrobacter amalonaticus → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGAAAAAACCGAATCACTCTGGTAGCGGCCAGATCCGCATTATTGGTGGTCAATGGCGTGGCCGTAAACTCCCGGTTCCGGATAGTCCCGGTCTGCGCCCAACCACCGACCGCGTACGCGAAACCTTATTTAACTGGCTGGCCCCGGTAATGGTCGATGCTCACTGCCTGGACTGCTTCGCCGGCAGCGGCGCGCTGGGGCTGGAAGCCCTCTCTCGCTATGCGGCAAATGCGACGCTTCTGGAAATGGATCGCGCGGTATCACAGCAGCTACAAAACAATCTCGCCACGCTGAAAGCTCCCCATGCCCGGGTCGTCAACACCAATACCCTGACATTTTTGGCCCAGACGGGTACGCCGCATAACGTGGTGTTTGTTGACCCGCCGTTTCGCAAAGGATTACTGGAAGAAACATTAACTCTTCTGGAAACTCATGGCTGGCTGGCAAATGAAGCGTATATTTACGTTGAAAGCGAAGTAGAAAACGGTTTGCCGCCGGTTCCGGTGAACTGGTCGCTGTACCGCGAAAAAGTCGCCGGACAGGTCGCCTATCGCCTTTACCAACGTGAAGCACGAGGAGAACACGATGCTGATTAA
PROTEIN sequence
Length: 199
MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVMVDAHCLDCFAGSGALGLEALSRYAANATLLEMDRAVSQQLQNNLATLKAPHARVVNTNTLTFLAQTGTPHNVVFVDPPFRKGLLEETLTLLETHGWLANEAYIYVESEVENGLPPVPVNWSLYREKVAGQVAYRLYQREARGEHDAD*