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NECEvent2014_7_1_scaffold_27_26

Organism: NECEvent2014_7_1_Citrobacter_KTE32-rel_52_45_partial

partial RP 19 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 30324..33230

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 968.0
  • Bit_score: 1916
  • Evalue 0.0
RNA polymerase-associated protein RapA n=1 Tax=Citrobacter sp. KTE151 RepID=R8X876_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 968.0
  • Bit_score: 1916
  • Evalue 0.0
  • rbh
ATP-dependent helicase similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 968.0
  • Bit_score: 1898
  • Evalue 0.0

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Taxonomy

Citrobacter sp. KTE151 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2907
ATGCCTTTTACACTTGGTCAACGCTGGATCAGCGATACAGAAAGCGAATTGGGACTTGGTACTGTTGTCGCCATGGATGCGCGAACCGTCACTTTACTTTTCTCATCGACGGGTGAAAACCGTCTGTATGCGCGCAGTGATTCCCCCGTGACCCGCGTGATGTTCAACCCTGGTGACACGATAACGAGCCATGAAGGCTGGCAACTGCATGTCGACGAAGTAAAAGAAGAAAACGGCCTGCTTGCCTATATCGGAACCCGCCTTGATACCGAAGAAACCGGTGTAACGCTGCGTGAAGTGCTGCTCGACAGCAAACTGGTTTTCAGTAAACCCCAGGATCGCCTGTTTGCCGGCCAGATTGACCGTATGGACCGCTTTGCGCTGCGCTATCGCGCACGTAAATTTCAGAGCGAACAGTACCGTATGCCGTGGAGTGGTTTGCGTGGCCAACGTACCAGCCTGATCCCCCACCAGCTCAACATTGCCCATGATGTCGGCCGTCGTCATGCCCCTCGCGTGCTACTGGCAGACGAAGTGGGTTTAGGTAAAACCATTGAAGCAGGGATGATCCTGCATCAACAGCTGCTGTCAGGCGCCGCGGAGCGCGTGCTGATCATCGTCCCGGAGACGTTACAGCACCAGTGGCTGGTCGAAATGCTGCGTCGTTTCAACCTGCGCTTTGCGCTGTTTGATGATGAGCGTTATGCAGAAGCGCAGCACGATGCCTACAACCCGTTTGAAACCGAACAGTTGGTTATCTGTTCGCTGGACTTTGCCCGTCGCAGTAAACAGCGTCTGGAGCACCTGTGTGATGCCGAGTGGGATCTGCTGATTGTCGATGAAGCCCATCACCTGGTGTGGAGCGAAGACGCGCCCAGCCGTGAATATATGGCCGTTGAACAGCTGGCAGAGCGCGTACCAGGCATCCTGCTGCTGACCGCAACGCCGGAACAGCTGGGCCTGGAAAGCCACTTTGCGCGCCTGCGTCTACTGGATCCAAGCCGCTTCCACGATTTCGCCCTGTTTGTTGAAGAACAGAAAAATTACCGTCCGGTCGCCGATGCCGTTGCCATGTTACTGGCTGGCAACAAGCTGAGTAACAATGAGCTGAACATGTTAGGTGACATGATTGGCGAACAGGACATTGAGCCGTTACTGCAGGCGGCAAACAGCGACAGCGAAGACGCCCAGAGCGCGCGTCAGGAGCTGGTTTCGATGCTGATGGACCGCCACGGCACCAGCCGCGTGCTGTTCCGAAATACCCGTAACGGTGTGAAAGGCTTCCCTAAACGCGAGCTGCATACCATCAAATTGCCGTTGCCAACCCAATACCAGACGGCCATTAAAGTCTCCGGCATTATGGGCGCGCGTAAGAGTGCGGAAGACCGCGCGCGCGACATGCTCTACCCGGAGCAGATTTATCAGGAATTCGAAGGCGACACCGGCACCTGGTGGAACTTTGACCCGCGCGTGGAATGGCTGATGGGCTACCTGACCAGCCACCGCTCGCAAAAAGTTCTGGTTATCTGCGCGAAAGCCACCACTGCGCTTCAGCTGGAGCAGGTTCTGCGCGAGCGCGAAGGTATCCGCGCCGCCGTATTCCATGAAGGGATGTCGATCATTGAACGTGACCGCGCTGCGGCCTGGTTTAGCGAAGAAGATAGCGGCGCCCAGGTAATGCTGTGCTCTGAAATCGGTTCCGAAGGGCGTAACTTCCAGTTCGCCAGCCATCTGGTGATGTTTGATCTGCCGTTCAATCCGGACCTGCTGGAACAGCGTATTGGCCGTCTGGACCGTATTGGTCAGGTGCATGATATCCAAATCCACGTTCCATACCTGGAAAAAACCGCGCAATCCGTGCTGGTGCGTTGGTACCACGAAGGTCTGGATGCGTTCGAACACACTTGCCCGACCGGACGTACCATCTATGACACGGTATATAACAATCTGATCGGCTACCTGGCTGAGCCAGAAAACACTGATGGCTTTGACGATCTGATCAAAACCTGTCGCGAACAGCATGACGCGCTGAAAGCACAGCTGGAGCAAGGTCGCGATCGCCTGCTGGAGATCCACTCTAACGGCGGCGAAAAAGCGCTGGCGCTGGCTGAGAGTATTGAAGAACAGGACGACGATACCAGCCTGATCGCCTTCGCCATGAACCTGTTTGATATCGTTGGTATTAATCAGGATGACCGTGGCGACAATTTGATCGTGCTGACACCGTCCGATCATATGCTGGTGCCGGATTTCCCTGGGCTGCCGGAAGATGGCTGTACCATTACGTTTGAGCGTGATGTTGCCCTGTCGCGTGAAGACGCGCAGTTTATTACCTGGGAGCATCCGCTGATCCGTAATGGTCTGGATCTGATCCTCTCCGGCGACACCGGAAGCAGCACCATTTCTTTGCTGAAAAACAAAGCATTACCAGTCGGTACTCTGCTGGTTGAACTGGTCTACGTCGTTGAAGCGCAAGCGCCAAAACAGCTGCAGTTAAACCGCTTCCTGCCGCCAACCCCGGTACGCATGCTGCTGGACAAAAACGGCAACAACCTTGCCGCGCAGGTTGAATTCGAAACCTTTAACCGTCAGCTCAGCGCCGTTAACCGCCACACCGGCAGTAAACTGGTCAACGCCGTACAGCAGGATGTGCATGCCATTCTGCAACTCGGTGAAGCGCAGGTAGAAAAATCGGCCCGCGCGCTGATCGACGCGGCGCGCAAAGAAGCGGACGAGAAGCTGACGGCTGAACTCTCCCGTCTGGAAGCGCTGCGTGCCGTTAACCCGAACATCCGTGATGACGAACTCAGCGCCATTGAAAGCAATCGTCAGCAGGTGATGGAAAGCCTGGATCAGGCGGGATGGCGTCTGGATGCCCTGCGCCTGATCGTCGTGACGCATCAGTAA
PROTEIN sequence
Length: 969
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSSTGENRLYARSDSPVTRVMFNPGDTITSHEGWQLHVDEVKEENGLLAYIGTRLDTEETGVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFETEQLVICSLDFARRSKQRLEHLCDAEWDLLIVDEAHHLVWSEDAPSREYMAVEQLAERVPGILLLTATPEQLGLESHFARLRLLDPSRFHDFALFVEEQKNYRPVADAVAMLLAGNKLSNNELNMLGDMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIGQVHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDTVYNNLIGYLAEPENTDGFDDLIKTCREQHDALKAQLEQGRDRLLEIHSNGGEKALALAESIEEQDDDTSLIAFAMNLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSARALIDAARKEADEKLTAELSRLEALRAVNPNIRDDELSAIESNRQQVMESLDQAGWRLDALRLIVVTHQ*