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NECEvent2014_7_1_scaffold_27_29

Organism: NECEvent2014_7_1_Citrobacter_KTE32-rel_52_45_partial

partial RP 19 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 35155..37563

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DNK1_CITFR similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 802.0
  • Bit_score: 1576
  • Evalue 0.0
  • rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 802.0
  • Bit_score: 1576
  • Evalue 0.0
LPS biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 802.0
  • Bit_score: 1554
  • Evalue 0.0

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2409
ATGAAAAAACGTATTCCCACTCTTCTGGCCACCATGATTGCCAGCGCCCTCTATAGCCATCAGGGTCTGGCAGCCGATCTCGCCTCACAGTGTATGCTGGGCGTGCCAAGCTATGACCGTCCTCTGGTACAGGGCGAGACTAATGAATTACCCGTCACCATCACTGCTGACAACGCGAAAGGGAATTACCCGGATGACGCGGTGTTTACCGGCAATGTGGACATCGCACAGGGTAACAGCCGCCTGCAGGCCGACGAAGTGCAGCTTCATCAGAAGCAGGCAGAGGGCCAGCCGGAGCCAGTTCGTACCGTCGATGCGCTGGGCAATGTTCATTATGATGACAATCAGGTTATTCTGAAGGGGCCGAAGGGCTGGTCTAATCTGAATACCAAAGATACCAACATCTGGGAAGGTGATTATCAGATGGTAGGCCGTCAGGGGCGCGGAAAAGCCGATCTGATGAAGCAGCGTGGGGAAAACCGCTATACCATTCTGGAAAATGGTAGCTTCACCTCCTGTCTGCCAGGTTCCAATACCTGGAGCGTCGTCGGTAGCGAAGTCATTCACGACCGTGAAGAACAGGTCGCAGAGATCTGGAACGCCCGTTTTAAACTGGGTCCGGTTCCGGTCTTTTACAGTCCTTATTTACAGTTACCCGTCGGCGATAAGCGTCGCTCTGGTTTCCTGATCCCGAACGCAAAATACTCTACCAATAACTATTTTGAGTTCTATCTCCCGTATTATTGGAACATTGCGCCCAATATGGACGCCACCATCACGCCGCATTATATGCACCGTCGTGGCGGTATCATGTGGGAGAACGAATTCCGCTACCTCACACAGGCGGGTGCAGGTCTGATGGAGTTCGACTATCTGAATTCCGATAAAGTGTACGAGGATGAACATCCGAAGGATGACAATTCCCGCCGCTGGCTGTTCTACTGGCAACACTCTGGTGTGATGGATCAGGTGTGGCGTTTCAACGTTGACTACACCAAGGTCAGCGACACCAGCTACTTTAACGACTTTGACAACAAGTACGGTTCCAGTACCGACGGCTACGCCACGCAAAAATTCAGCGTCGGCTATGCGGTACAAAACTTTGACGCGACGGTTTCGACCAAGCAGTTCCAGGTCTTCGACGCACAAAACAGTAACAGTTACTCTGCGCAGCCGCAGTTAGACGTCAACTACTACCAGAATGATGTGGGTCCGTTTGACACCCGGATTTATGGTCAGGCAGTCCATTTCGTTAATACCAACGACAACAGGCCGGAAGCAACTCGTTTACACCTTGAACCGACCATCAATCTACCATTGTCGAATAATTGGGGAAGTATCAACACTGAGCTGAAGCTGTTGGCAACGCACTATCAGCAAAACAACATCAGCGAGTATCAATCATTCGCAAGAAATAATTATCGTAACAATCCTAATCCGGATAATTTAAATACCCTTAACGCGGCGAATTCCCTGGAAGATTCCGTCAACCGCGTCATGCCGCAGTTTAAAGTTGACGGTAAACTGGTCTTCGAACGCGATATGGAAATGCTGGCCCCGGGATATACCCAGACGCTGGAGCCGCGAGCGCAGTACCTGTACGTACCGTATCGCGATCAAAGTAATATTTTTAACTATGACTCGTCCCTGCTGCAATCTGACTACAGCGGCCTGTTCCGCGATCGCACCTATGGCGGTCTGGACCGCATCGCATCTGCCAACCAGGTAACGACCGGGGTCACATCTCGCGTTTATGATGACGCGGCCGTTGAACGTTTTAATATTTCTGTGGGTCAAATCTACTATTTCACCGAGTCTCGCACTGGCGATGACAACATTAAATGGGAGAATGACGACAAAACGGGCTCACTGGTATGGGCTGGTGACACCTACTGGCGCATCTCCGATCGCTGGGGTTTACGCAGTGGGATCCAGTACGACACGCGTCTGGACAGTGTTGCAACCAGCAGCAGCAGTATCGAATACCGCCGCGACGAAAACCGTATGCTGCAGCTGAACTACCGTTATGCCAGCTCTGAATATATCCAGGCAACCCTGCCGTCTTACTACTCTACAGCAGAGCAGTATAAAAACGGGATTTCACAGGTGGGTGCGGTAGCAAGCTTCCCGATCGCCGACCGCTGGTCGATTGTCGGGGCTTACTACTTTGATACCAACGTGAATAAAGAAGCGGATTCCATGCTGGGTCTGCAGTACAACTCCTGCTGTTACGCCATTCGCTTCGGCTACGAACGTAAGCTGAACGGCTGGGATGACACTCAGAAACATGCAGTTTATGACAACACGATCGGCTTTAATATCGAACTACGCGGCCTGAGTTCTAACTACGGTCTCGGCACCAACCAAATGTTGCGTTCTAACATTTTGCCGTATCAAAGCTCTTTATGA
PROTEIN sequence
Length: 803
MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVQGETNELPVTITADNAKGNYPDDAVFTGNVDIAQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWSNLNTKDTNIWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSNTWSVVGSEVIHDREEQVAEIWNARFKLGPVPVFYSPYLQLPVGDKRRSGFLIPNAKYSTNNYFEFYLPYYWNIAPNMDATITPHYMHRRGGIMWENEFRYLTQAGAGLMEFDYLNSDKVYEDEHPKDDNSRRWLFYWQHSGVMDQVWRFNVDYTKVSDTSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFDAQNSNSYSAQPQLDVNYYQNDVGPFDTRIYGQAVHFVNTNDNRPEATRLHLEPTINLPLSNNWGSINTELKLLATHYQQNNISEYQSFARNNYRNNPNPDNLNTLNAANSLEDSVNRVMPQFKVDGKLVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSNIFNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRVYDDAAVERFNISVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISDRWGLRSGIQYDTRLDSVATSSSSIEYRRDENRMLQLNYRYASSEYIQATLPSYYSTAEQYKNGISQVGAVASFPIADRWSIVGAYYFDTNVNKEADSMLGLQYNSCCYAIRFGYERKLNGWDDTQKHAVYDNTIGFNIELRGLSSNYGLGTNQMLRSNILPYQSSL*