ggKbase home page

NECEvent2014_7_1_scaffold_38_15

Organism: NECEvent2014_7_1_Citrobacter_KTE32-rel_52_45_partial

partial RP 19 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 13943..15013

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide core heptosyltransferase rfaQ n=1 Tax=Citrobacter sp. KTE32 RepID=R8V6C8_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 356.0
  • Bit_score: 720
  • Evalue 1.10e-204
  • rbh
Lipopolysaccharide core heptosyltransferase rfaQ {ECO:0000313|EMBL:KDF08140.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 356.0
  • Bit_score: 703
  • Evalue 1.20e-199
waaQ; lipopolysaccharide core biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 345.0
  • Bit_score: 566
  • Evalue 7.60e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
GTGGATAAGCCAATTAATAGAATTCTGGTCATAAAAATGCGTTTTCACGGAGATATGTTGTTAACAACTCCGGTCATTAGTACGCTAAAGCAGAACTATCCTGATGCGAAAATCGACGTGCTTCTCTATCAGGATACCATCCCAATTTTGTCGGAAAACCCAGAAATTAATGCCCTTTATGGTATTAAAAATAAAAAGACAAAAGTAACTGATAAAATTACTAATTTTCTGCACCTGATCGGAACGTTGCGCGCAAATGGGTATGATTTAGTTGTAAACCTTACCGATCAGTGGATGGTTGCGATACTGATGCGGCTACTGAACGCGCCAATCAAAATCTCTCAAGATTATGCACATCGGCAATCTTCTTTTTGGAAAAAAAGTTTTACATGTCTGGCTCCGCTTAGCGGTGAAAATGTGGTGGAAAGCAATCTGTCTGTGCTGGCCCCGTTGAAACTTAAATCGACTGTTACACATACAACAATGAGCTATCCGGAGGATAGCTGGGAACGTATGCGCACAGAATTAAATCGGGCTGGAGTTGGTGATGAATACGTTGTAATTCAACCAACGGCACGCCAACGCTTCAAATGCTGGAATAACGAAAAGTTTTCACAGGTAATTGACGCCTTACACCAGCGTGGTTTGGAGGTAGTTATGACCTCTGGCCCAGGCGAAGACGATCTGGCTTGCGTGAATGAAATTGCACAAGGTTGCAAAGAAAGGCCCGTTACTGCGCTGGCGGGAAAGATGAGCTTCCCCGAGCTAGGAGCGGTCATCGATCATGCACAGTTGTTTATTGGGGTGGACTCTGCTCCGGGACACATTGCTGCTGCGGTTGATACACCATTGATATGCCTGTTTGGCGCAACGGATCATAATTTTTGGCGACCATGGTCAAAGCAGATGATTCAATTTTGGGCTGGTGATTATCGTCCGATGCCTCCACGCGAGCAGCGCGATCGCAATGAAATGTATCTTTCGGTGATACCCGCTGACGATGTTATTGCTGCTATCGATAAATTATTACCGGGTAGACTTGTGCCGCCACAAGCGGGGAGTCCCGTATGA
PROTEIN sequence
Length: 357
VDKPINRILVIKMRFHGDMLLTTPVISTLKQNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKTKVTDKITNFLHLIGTLRANGYDLVVNLTDQWMVAILMRLLNAPIKISQDYAHRQSSFWKKSFTCLAPLSGENVVESNLSVLAPLKLKSTVTHTTMSYPEDSWERMRTELNRAGVGDEYVVIQPTARQRFKCWNNEKFSQVIDALHQRGLEVVMTSGPGEDDLACVNEIAQGCKERPVTALAGKMSFPELGAVIDHAQLFIGVDSAPGHIAAAVDTPLICLFGATDHNFWRPWSKQMIQFWAGDYRPMPPREQRDRNEMYLSVIPADDVIAAIDKLLPGRLVPPQAGSPV*