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NECEvent2014_7_1_scaffold_44_4

Organism: NECEvent2014_7_1_Citrobacter_KTE32-rel_52_45_partial

partial RP 19 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 3098..6346

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=35703 species="Bacteria; Proteobacteria; Gamm similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 999.99
  • Bit_score: 2075
  • Evalue 0.0
Ribonuclease E n=1 Tax=Citrobacter sp. KTE32 RepID=R8VH13_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 999.99
  • Bit_score: 2077
  • Evalue 0.0
  • rbh
rne; ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 999.99
  • Bit_score: 1946
  • Evalue 0.0

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Taxonomy

Citrobacter amalonaticus → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3249
ATGAAAAGAATGTTAATTAACGCGACTCAGCAGGAAGAGTTGCGTGTCGCCCTTGTAGATGGGCAGCGTCTGTACGATCTGGATATCGAAAGTCCTGGACACGAACAGAAAAAAGCCAACATCTATAAAGGCAAAATTACCCGTATTGAACCGAGTCTGGAAGCTGCTTTTGTTGATTACGGCGCTGAACGTCACGGTTTCCTCCCGTTAAAAGAAATTGCCCGCGAATACTTCCCCGCTAGCTACAACTCCCATGGTCGTCCCAACATTAAAGACGTGTTGCGCGAAGGTCAGGAAGTCATTGTTCAGATCGATAAAGAAGAACGCGGCAATAAAGGCGCTGCGCTGACCACCTTTATCAGCCTGGCAGGTAGTTATCTGGTTCTGATGCCGAACAACCCGCGCGCGGGCGGCATCTCCCGTCGCATTGAAGGCGACGACCGTACCGAATTAAAAGAAGCGCTGGCAAGCTTGGAACTGCCTGACGGCATGGGGCTTATCGTGCGTACCGCAGGTGTCGGCAAATCTGCCGAAGCGCTGCAGTGGGACCTGAGTTTCCGCCTGAAGCACTGGGAAGCGATTCAAAAAGCCGCTGACAGCCGCCCTGCTCCGTTCCTGATCCATCAGGAAAGCAACGTTATCGTTCGCGCATTCCGTGACTATTTACGTCAGGACATCGGCGAAATCCTCATCGACAACCCGAAAGTTATGGAGATGGCGCGTCAGCACATCGCCGCGCTGGGTCGTCCGGATTTCAGCAGCAAAATCAAACTGTACACCGGTGAAATCCCGCTGTTCAGCCACTATCAAATCGAATCTCAGATTGAGTCCGCGTTCCAGCGCGAAGTGCGTCTGCCGTCCGGCGGCTCAATCGTTATCGACAGCACAGAAGCGCTGACCGCTATCGATATCAACTCCGCACGCGCGACCCGCGGCGGCGACATCGAAGAAACTGCGTTCAACACCAACCTTGAAGCAGCCGATGAAATTGCTCGTCAGCTGCGTCTGCGCGACCTCGGCGGCCTGATTGTAATCGACTTCATTGATATGACGCCGGTTCGTCACCAGCGTGCGGTTGAAAACCGTCTGCGTGAAGCCGTGCGTCAGGACAGAGCGCGTATTCAAATCAGCCATATTTCTCGCTTCGGCCTGCTGGAGATGTCCCGCCAGCGTCTGAGCCCGTCGCTGGGTGAATCCAGCCATCACGTATGCCCACGCTGCTCCGGCACGGGTACCGTACGTGATAACGAATCACTGTCGCTGTCTATTCTGCGTCTGATCGAAGAAGAAGCGCTGAAAGAAAATACGCAGGAAGTTCACGCTATTGTTCCTGTGCCGATCGCATCCTACCTGCTCAACGAAAAACGTACCGCGGTAAATGCCATCGAGACGCGTCAGAATGGCGTGCGCTGTGTGATTGTGCCAAACGATCAGATGGAAACCCCGCATTACTCCGTGCTGCGCGTACGCAAAGGGGAAGAAACACCAACCCTGAGCTACCTGCTGCCGAAACTGCATGAAGAAGCGATGGCATTGCCGACGGAAGAAGAGTTCGTCGAGCGTAAACAGCCAGAGCAGCCGGCATTGGCCACCTTTGCTATGCCAGAGGTGCCGCCAGCCCCTGCTTTGCAGGAACCTACTGCGAAGGCCGCCGCGCCTAAAGCCGCAGCAGCGACCGCGGCCGTCGCCGCGCAGCAAGGTTTGATTAGCCGTTTCTTCGGCGCACTGAAGTCCATCTTCAGCGGTAGCGAAGAAGTGAAACCGGTTGAACAACCTGCGCCGAAAGCTGAAGAGAAAACCGACCGCCAGCAGGATCGTCGTAAACCGCGTCAGAACAATCGTCGCGACCGTAACGATCGTCGTGATAATCGCGACAACCGTGGCGAGCGTGATAACCGTAACGAGCGTTCAGAAAGCGGCGAAAACCGTGAAGATAACCGCCGTAACCGCCGTCAGTCGCAGCAGCAAAATGCGGAAGCGCGCGATAACCGCCAGCAGTCTACTGAGGTCGCCGACAAAGCGAAATCCGGTGATGACCAGCAGGCTCCGCGTCGCGAGCGCAACCGCCGTCGCAACGATGATAAGCGTCAGGCGCAGCAGGAAGTTAAAGAGCTGAACCTGGCAGAACAACCTGCGCAGGATACCGAGCAGGAAGAGCGCGTTCGTCAGCCTCAGACTCGCCGTAAACAGCGTCAGCTGACTCAGAAAGTTCGTTACACAGACAGCCCGGCTGTTGAAGCCGAAGTCGCGACTGCCGAAGTGGTCACTGAAACGGCAGTCGCTCAACCAACTGAACAGCCCGTACCGGCACAGCGTACTGAACTGGCGAAAGTTGATCTGCCTGCCGTCGTTGTGACTGAGCAGGAAGACAACAGCGAAGCGCGTGACTCTAATGGTATGCCGCGTCGTTCCCGTCGCTCACCTCGCCATCTGCGCGTCAGTGGACAACGCCGTCGTCGCTATCGTGATGAGCGTTACCCGGTTCAGTCGCCGATGCCGTTAACGGTTGCCTGCGCATCTCCAGAATTAGCGTCCGGTAAAGTCTGGATCCGCTACCCTGTTGCTCGTCCTCAGGATCAGCAGGTTGCAGAGCAGCGCGAGCAGGAAACGGTTCAGGGGCAAGCTGTACCTGTCGCCGTAGAGCCTCAGGTTGCTGCAGCTGCCGTTGAGCATATTGTGAACGCCCCTGCGTCGGTTGAAACCGTACAGCCAGAGGTGGTCATTGCTGAACCTCAGGCTACCGTCGTTGAAACCACGCATCCGGAAGTCATCGCTACTCCGGTCGAGGAACAACCGCAAATTATCGCTGAATCTGACGCGCCTGTTGCTGAGGATACCGCGGCGAAAGCCGAACCTGTCGCTGAAATCGTGGCTGCGCCGGTTGTCGAAGAATCTGCGGAGGTTGTTATTTCTCAGCCTGAAGTGGCTGAAGAGATTGCAGAGGTTGTGGAAACAGCGCCAGTGGTTGAAGAAGTTGCCGCGCCGCAAGAGGTTGTTGCAGCACCGGTCGTCGAAGACGCAGTCGTTAAGGCTGAAGTTGTCGCAACCCGCGTTGACGCAGAACATCTTCACAGCCATGCGGCCGCACCGATGACCCGTGCTCCGGCACCAGAGTATGTGCCTGAAGCGCCGCGTCATAGTGACTGGCAACGCCCGGAATTCACCTTTGAAGGTAAAGGTGCCGCAGGTGGACACAGCGCCACGCACCAGGCGACTGCGCCAGCAACGCGCCCGCAGCCCGTTGAGTAA
PROTEIN sequence
Length: 1083
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPASYNSHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIQKAADSRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVMEMARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRTAVNAIETRQNGVRCVIVPNDQMETPHYSVLRVRKGEETPTLSYLLPKLHEEAMALPTEEEFVERKQPEQPALATFAMPEVPPAPALQEPTAKAAAPKAAAATAAVAAQQGLISRFFGALKSIFSGSEEVKPVEQPAPKAEEKTDRQQDRRKPRQNNRRDRNDRRDNRDNRGERDNRNERSESGENREDNRRNRRQSQQQNAEARDNRQQSTEVADKAKSGDDQQAPRRERNRRRNDDKRQAQQEVKELNLAEQPAQDTEQEERVRQPQTRRKQRQLTQKVRYTDSPAVEAEVATAEVVTETAVAQPTEQPVPAQRTELAKVDLPAVVVTEQEDNSEARDSNGMPRRSRRSPRHLRVSGQRRRRYRDERYPVQSPMPLTVACASPELASGKVWIRYPVARPQDQQVAEQREQETVQGQAVPVAVEPQVAAAAVEHIVNAPASVETVQPEVVIAEPQATVVETTHPEVIATPVEEQPQIIAESDAPVAEDTAAKAEPVAEIVAAPVVEESAEVVISQPEVAEEIAEVVETAPVVEEVAAPQEVVAAPVVEDAVVKAEVVATRVDAEHLHSHAAAPMTRAPAPEYVPEAPRHSDWQRPEFTFEGKGAAGGHSATHQATAPATRPQPVE*