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gwa2_scaffold_117_11 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Cold shock protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U230_9EURY similarity UNIREF
DB: UNIREF90
58.0 0.0 83 3.00e+00 rbi:RB2501_14154
Cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=AR4 UNIPROT
DB: UniProtKB
100.0 63.0 131 3.20e-28 ggdbv1_5041610
Cold shock protein similarity KEGG
DB: KEGG
63.9 61.0 81 7.70e-14 rbi:RB2501_14154
COLD_SHOCK (db=PatternScan db_id=PS00352 from=14 to=32 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 rbi:RB2501_14154
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=62 evalue=1.2e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 rbi:RB2501_14154
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=63 evalue=1.5e-24 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMPIR
0.0 0.0 0 1.00e+00 rbi:RB2501_14154
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=63 evalue=2.0e-13 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 rbi:RB2501_14154
no description (db=HMMSmart db_id=SM00357 from=2 to=63 evalue=3.9e-18 interpro_id=IPR011129 interpro_description=Cold shock protein GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 3.00e+00 rbi:RB2501_14154
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=62 evalue=3.5e-16) iprscan interpro
DB: HMMPanther
0.0 0.0 0 3.00e+00 rbi:RB2501_14154
(db=HMMPfam db_id=PF00313 from=1 to=62 evalue=5.7e-23 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 5.00e+00 rbi:RB2501_14154
COLDSHOCK (db=FPrintScan db_id=PR00050 from=3 to=18 evalue=6.8e-06 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 6.00e+00 rbi:RB2501_14154