ggKbase home page

gwa2_scaffold_135_32 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
30S ribosomal protein S17P n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYH7_9EURY similarity UNIREF
DB: UNIREF90
52.0 0.0 90 2.00e+00 mjh:JH146_1380
rps17p; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=AR4 UNIPROT
DB: UniProtKB
100.0 116.0 233 1.10e-58 ggdbv1_5041768
30S ribosomal protein S17 similarity KEGG
DB: KEGG
51.8 83.0 92 1.10e-16 mjh:JH146_1380
seg (db=Seg db_id=seg from=95 to=116) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 mjh:JH146_1380
RIBOSOMAL_S17 (db=PatternScan db_id=PS00056 from=58 to=70 evalue=0.0 interpro_id=IPR019979 interpro_description=Ribosomal protein S17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 mjh:JH146_1380
(db=HMMPfam db_id=PF00366 from=13 to=79 evalue=1.8e-21 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 mjh:JH146_1380
RIBOSOMALS17 (db=FPrintScan db_id=PR00973 from=27 to=50 evalue=4.4e-07 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 4.00e+00 mjh:JH146_1380
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=6 to=81 evalue=5.7e-19 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
0.0 0.0 0 5.00e+00 mjh:JH146_1380
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=7 to=109 evalue=7.7e-21 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 7.00e+00 mjh:JH146_1380
40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER (db=HMMPanther db_id=PTHR10744 from=4 to=79 evalue=7.4e-20 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPanther
0.0 0.0 0 7.00e+00 mjh:JH146_1380