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gwa2_scaffold_503_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase sigma factor n=4 Tax=Mobiluncus curtisii RepID=D6ZJ10_MOBCV similarity UNIREF
DB: UNIREF90
38.0 0.0 113 6.00e+00 mcu:HMPREF0573_10390
rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=AR4 UNIPROT
DB: UniProtKB
100.0 186.0 370 1.20e-99 ggdbv1_5044162
rpoE; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
38.2 178.0 114 4.10e-23 mcu:HMPREF0573_10390
(db=HMMPfam db_id=PF04542 from=21 to=81 evalue=1.1e-12 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 mcu:HMPREF0573_10390
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=105 to=172 evalue=1.3e-14 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 mcu:HMPREF0573_10390
(db=HMMPfam db_id=PF08281 from=115 to=164 evalue=4.1e-15 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 mcu:HMPREF0573_10390
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=11 to=170 evalue=4.5e-34 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
0.0 0.0 0 4.00e+00 mcu:HMPREF0573_10390
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=5 to=78 evalue=6.8e-17 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor iprscan interpro
DB: superfamily
0.0 0.0 0 6.00e+00 mcu:HMPREF0573_10390
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=5 to=82 evalue=7.9e-14) iprscan interpro
DB: Gene3D
0.0 0.0 0 7.00e+00 mcu:HMPREF0573_10390