Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA polymerase sigma factor n=4 Tax=Mobiluncus curtisii RepID=D6ZJ10_MOBCV | similarity |
UNIREF
DB: UNIREF90 |
38.0 | 0.0 | 113 | 6.00e+00 | mcu:HMPREF0573_10390 |
rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=AR4 |
UNIPROT
DB: UniProtKB |
100.0 | 186.0 | 370 | 1.20e-99 | ggdbv1_5044162 | |
rpoE; RNA polymerase sigma factor RpoE | similarity |
KEGG
DB: KEGG |
38.2 | 178.0 | 114 | 4.10e-23 | mcu:HMPREF0573_10390 |
(db=HMMPfam db_id=PF04542 from=21 to=81 evalue=1.1e-12 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | mcu:HMPREF0573_10390 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=105 to=172 evalue=1.3e-14 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | mcu:HMPREF0573_10390 |
(db=HMMPfam db_id=PF08281 from=115 to=164 evalue=4.1e-15 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 4.00e+00 | mcu:HMPREF0573_10390 |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=11 to=170 evalue=4.5e-34 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 4.00e+00 | mcu:HMPREF0573_10390 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=5 to=78 evalue=6.8e-17 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 6.00e+00 | mcu:HMPREF0573_10390 |
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=5 to=82 evalue=7.9e-14) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 7.00e+00 | mcu:HMPREF0573_10390 |