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NECEvent2014_7_3_scaffold_376_3

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(959..1489)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1182671 species="B similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 361
  • Evalue 5.40e-97
Uncharacterized protein n=56 Tax=Escherichia RepID=H9UND0_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 361
  • Evalue 3.80e-97
  • rbh
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 361
  • Evalue 1.10e-97
  • rbh

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCTGAACCGCAACGTCTGTTCTTTGCTATCGACTTACCTGCAGAAATCCGCGAACAGATTATCCACTGGCGCGCCAAACACTTCCCACCTGAGGCGGGACGTCCGGTCGCCGCCGATAATTTGCATCTGACTCTGGCATTTTTAGGCGAAGTGAGCGCCGAGAAAGAGAAGGCGCTTTCTCTTTTAGCCGGACGGATTCGTCAACCTGGTTTCACACTCACGCTTGATGACGCCGGACAATGGCTGCGTTCGCGTGTGGTGTGGTTAGGGATGCGTCAGCCTCCACGCGGCTTAATCCAGCTGGCGAATATGCTCCGTTCACAGGCTGCCCGCAGCGGTTGTTTTCAAAGCAATCGTCCGTTTCATCCACATATTACCTTATTGCGCGACGCCAGCGAGGCGGTGACAATCCCGCCGCCGGGTTTTAACTGGTCTTATGCGGTGACGGAGTTCACCCTTTACGCCTCCTCGTTTGCCCGTGGACGCACACGCTACACGCCGCTAAAACGCTGGGCGCTAACGCAATAA
PROTEIN sequence
Length: 177
MSEPQRLFFAIDLPAEIREQIIHWRAKHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ*