ggKbase home page

NECEvent2014_7_3_scaffold_558_5

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(4294..4617)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein SoxS n=1366 Tax=Gammaproteobacteria RepID=SOXS_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 107.0
  • Bit_score: 219
  • Evalue 1.40e-54
soxS; DNA-binding transcriptional dual regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 107.0
  • Bit_score: 219
  • Evalue 4.00e-55
Regulatory protein SoxS {ECO:0000313|EMBL:EGI52375.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 107.0
  • Bit_score: 219
  • Evalue 2.00e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGTCCCATCAGAAAATTATTCAGGATCTTATCGCATGGATTGACGAGCATATTGACCAGCCGCTTAACATTGATGTAGTCGCAAAAAAATCAGGCTATTCAAAGTGGTACTTGCAACGAATGTTCCGCACGGTGACGCATCAGACGCTTGGCGATTACATTCGCCAACGCCGCCTGTTACTGGCCGCCGTTGAGTTGCGCACCACCGAGCGTCCGATTTTTGATATCGCAATGGACCTGGGTTATGTCTCGCAGCAGACCTTCTCCCGCGTTTTCCGTCGGCAGTTTGATCGCACTCCCAGCGATTATCGCCACCGCCTGTAG
PROTEIN sequence
Length: 108
MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL*