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NECEvent2014_7_3_scaffold_627_7

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(5627..6073)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance outer membrane protein mdtQ n=2 Tax=Escherichia coli RepID=S0XDP1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 146.0
  • Bit_score: 295
  • Evalue 2.80e-77
Multidrug resistance outer membrane protein mdtQ {ECO:0000313|EMBL:EQY77296.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 146.0
  • Bit_score: 295
  • Evalue 4.00e-77
putative multidrug resistance outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 146.0
  • Bit_score: 294
  • Evalue 1.40e-77

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGAATCGTGATTCCTTTTATCCAGCCATCGCCTGTTTTCCGCTGTTACTGATGCTGGCCGGGTGTGCGCCTATGCATGAAACCCGCCAGGCGTTAAGCCAGCAAACGCCCGCTGCACAAGTTGACACCGCATTACCCACGGCGCTGAAAAATGGTTGGCCAGACAGCCAATGGTGGCTGGAGTATCACGATAATCAACTCACTTCATTAATTAACAATGCACTACAGAACGCACCGGATATGCAGGTGGCTGAACAGCGCATTCAGCTAGCTGAAGCCCAGGCGAAGGCAGTTGCCACTCAGGATGGTCCGCAGATCGACTTTTCGGCGGATATGGAGCGGCAAAAAATGTCGGCAGAAGGCTTAATGGGGCCGTTTGCTCTGAACGATCCGGCCGCAGGTACGACCGGCCCGTGGTACACCGGGGAAAGAATCGGGCGGAGGTAA
PROTEIN sequence
Length: 149
MNRDSFYPAIACFPLLLMLAGCAPMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWLEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSAEGLMGPFALNDPAAGTTGPWYTGERIGRR*